Gene : Lsat_1_v5_gn_7_21701 L. sativa V8
Defline:  (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) Genomic Order:  716
Name:  ? Lsat_1_v5_gn_7_21701 Secondary Identifier:  ? PAC:38912473
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_21701 0.5kb upstream 0.5kb upstream 3432   true Lsat_1_v8_lg_7: 27646329-27649760 Lactuca sativa
Lsat_1_v5_gn_7_21701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 27649261-27649760 Lactuca sativa
Lsat_1_v5_gn_7_21701 0.5kb downstream 0.5kb downstream 3432   true Lsat_1_v8_lg_7: 27645829-27649260 Lactuca sativa
Lsat_1_v5_gn_7_21701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 27645829-27646328 Lactuca sativa
Lsat_1_v5_gn_7_21701 1.0kb upstream 1.0kb upstream 3932   true Lsat_1_v8_lg_7: 27646329-27650260 Lactuca sativa
Lsat_1_v5_gn_7_21701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 27649261-27650260 Lactuca sativa
Lsat_1_v5_gn_7_21701 1.0kb downstream 1.0kb downstream 3932   true Lsat_1_v8_lg_7: 27645329-27649260 Lactuca sativa
Lsat_1_v5_gn_7_21701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 27645329-27646328 Lactuca sativa
Lsat_1_v5_gn_7_21701 2.0kb upstream 2.0kb upstream 4932   true Lsat_1_v8_lg_7: 27646329-27651260 Lactuca sativa
Lsat_1_v5_gn_7_21701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 27649261-27651260 Lactuca sativa
Lsat_1_v5_gn_7_21701 2.0kb downstream 2.0kb downstream 4932   true Lsat_1_v8_lg_7: 27644329-27649260 Lactuca sativa
Lsat_1_v5_gn_7_21701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 27644329-27646328 Lactuca sativa
Lsat_1_v5_gn_7_21701 5.0kb upstream 5.0kb upstream 7932   true Lsat_1_v8_lg_7: 27646329-27654260 Lactuca sativa
Lsat_1_v5_gn_7_21701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 27649261-27654260 Lactuca sativa
Lsat_1_v5_gn_7_21701 5.0kb downstream 5.0kb downstream 7932   true Lsat_1_v8_lg_7: 27641329-27649260 Lactuca sativa
Lsat_1_v5_gn_7_21701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 27641329-27646328 Lactuca sativa
Lsat_1_v5_gn_7_21701 10.0kb upstream 10.0kb upstream 12932   true Lsat_1_v8_lg_7: 27646329-27659260 Lactuca sativa
Lsat_1_v5_gn_7_21701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 27649261-27659260 Lactuca sativa
Lsat_1_v5_gn_7_21701 10.0kb downstream 10.0kb downstream 12932   true Lsat_1_v8_lg_7: 27636329-27649260 Lactuca sativa
Lsat_1_v5_gn_7_21701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 27636329-27646328 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470995 5263 Asterids View MSA
123746932 5271 Pentapetalae View MSA
122792808 5272 Eudicot View MSA
122046027 5273 Angiosperm View MSA
121345659 5274 Embryophyte View MSA
123426333 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain