Gene : Lsat_1_v5_gn_7_22140 L. sativa V8
Defline:  (1 of 2) PTHR31384//PTHR31384:SF5 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 3 Genomic Order:  755
Name:  ? Lsat_1_v5_gn_7_22140 Secondary Identifier:  ? PAC:38912512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_22140 0.5kb upstream 0.5kb upstream 4617   true Lsat_1_v8_lg_7: 30074289-30078905 Lactuca sativa
Lsat_1_v5_gn_7_22140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 30078406-30078905 Lactuca sativa
Lsat_1_v5_gn_7_22140 0.5kb downstream 0.5kb downstream 4617   true Lsat_1_v8_lg_7: 30073789-30078405 Lactuca sativa
Lsat_1_v5_gn_7_22140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 30073789-30074288 Lactuca sativa
Lsat_1_v5_gn_7_22140 1.0kb upstream 1.0kb upstream 5117   true Lsat_1_v8_lg_7: 30074289-30079405 Lactuca sativa
Lsat_1_v5_gn_7_22140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 30078406-30079405 Lactuca sativa
Lsat_1_v5_gn_7_22140 1.0kb downstream 1.0kb downstream 5117   true Lsat_1_v8_lg_7: 30073289-30078405 Lactuca sativa
Lsat_1_v5_gn_7_22140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 30073289-30074288 Lactuca sativa
Lsat_1_v5_gn_7_22140 2.0kb upstream 2.0kb upstream 6117   true Lsat_1_v8_lg_7: 30074289-30080405 Lactuca sativa
Lsat_1_v5_gn_7_22140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 30078406-30080405 Lactuca sativa
Lsat_1_v5_gn_7_22140 2.0kb downstream 2.0kb downstream 6117   true Lsat_1_v8_lg_7: 30072289-30078405 Lactuca sativa
Lsat_1_v5_gn_7_22140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 30072289-30074288 Lactuca sativa
Lsat_1_v5_gn_7_22140 5.0kb upstream 5.0kb upstream 9117   true Lsat_1_v8_lg_7: 30074289-30083405 Lactuca sativa
Lsat_1_v5_gn_7_22140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 30078406-30083405 Lactuca sativa
Lsat_1_v5_gn_7_22140 5.0kb downstream 5.0kb downstream 9117   true Lsat_1_v8_lg_7: 30069289-30078405 Lactuca sativa
Lsat_1_v5_gn_7_22140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 30069289-30074288 Lactuca sativa
Lsat_1_v5_gn_7_22140 10.0kb upstream 10.0kb upstream 14117   true Lsat_1_v8_lg_7: 30074289-30088405 Lactuca sativa
Lsat_1_v5_gn_7_22140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 30078406-30088405 Lactuca sativa
Lsat_1_v5_gn_7_22140 10.0kb downstream 10.0kb downstream 14117   true Lsat_1_v8_lg_7: 30064289-30078405 Lactuca sativa
Lsat_1_v5_gn_7_22140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 30064289-30074288 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482982 5263 Asterids View MSA
123753340 5271 Pentapetalae View MSA
122797865 5272 Eudicot View MSA
122051660 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain