Gene : Lsat_1_v5_gn_7_23661 L. sativa V8
Defline:  (1 of 3) PTHR10891//PTHR10891:SF619 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  771
Name:  ? Lsat_1_v5_gn_7_23661 Secondary Identifier:  ? PAC:38914634
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_23661 0.5kb upstream 0.5kb upstream 5632   true Lsat_1_v8_lg_7: 30730672-30736303 Lactuca sativa
Lsat_1_v5_gn_7_23661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 30730672-30731171 Lactuca sativa
Lsat_1_v5_gn_7_23661 0.5kb downstream 0.5kb downstream 5632   true Lsat_1_v8_lg_7: 30731172-30736803 Lactuca sativa
Lsat_1_v5_gn_7_23661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 30736304-30736803 Lactuca sativa
Lsat_1_v5_gn_7_23661 1.0kb upstream 1.0kb upstream 6132   true Lsat_1_v8_lg_7: 30730172-30736303 Lactuca sativa
Lsat_1_v5_gn_7_23661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 30730172-30731171 Lactuca sativa
Lsat_1_v5_gn_7_23661 1.0kb downstream 1.0kb downstream 6132   true Lsat_1_v8_lg_7: 30731172-30737303 Lactuca sativa
Lsat_1_v5_gn_7_23661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 30736304-30737303 Lactuca sativa
Lsat_1_v5_gn_7_23661 2.0kb upstream 2.0kb upstream 7132   true Lsat_1_v8_lg_7: 30729172-30736303 Lactuca sativa
Lsat_1_v5_gn_7_23661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 30729172-30731171 Lactuca sativa
Lsat_1_v5_gn_7_23661 2.0kb downstream 2.0kb downstream 7132   true Lsat_1_v8_lg_7: 30731172-30738303 Lactuca sativa
Lsat_1_v5_gn_7_23661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 30736304-30738303 Lactuca sativa
Lsat_1_v5_gn_7_23661 5.0kb upstream 5.0kb upstream 10132   true Lsat_1_v8_lg_7: 30726172-30736303 Lactuca sativa
Lsat_1_v5_gn_7_23661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 30726172-30731171 Lactuca sativa
Lsat_1_v5_gn_7_23661 5.0kb downstream 5.0kb downstream 10132   true Lsat_1_v8_lg_7: 30731172-30741303 Lactuca sativa
Lsat_1_v5_gn_7_23661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 30736304-30741303 Lactuca sativa
Lsat_1_v5_gn_7_23661 10.0kb upstream 10.0kb upstream 15132   true Lsat_1_v8_lg_7: 30721172-30736303 Lactuca sativa
Lsat_1_v5_gn_7_23661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 30721172-30731171 Lactuca sativa
Lsat_1_v5_gn_7_23661 10.0kb downstream 10.0kb downstream 15132   true Lsat_1_v8_lg_7: 30731172-30746303 Lactuca sativa
Lsat_1_v5_gn_7_23661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 30736304-30746303 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792090 5273 Angiosperm View MSA
121475755 5263 Asterids View MSA
123745567 5271 Pentapetalae View MSA
122796343 5272 Eudicot View MSA
121063344 5274 Embryophyte View MSA
123103101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain