Gene : Lsat_1_v5_gn_7_23521 L. sativa V8
Defline:  (1 of 3) PTHR21433//PTHR21433:SF4 - TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA // SUBFAMILY NOT NAMED Genomic Order:  775
Name:  ? Lsat_1_v5_gn_7_23521 Secondary Identifier:  ? PAC:38914869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_23521 0.5kb upstream 0.5kb upstream 3559   true Lsat_1_v8_lg_7: 30942216-30945774 Lactuca sativa
Lsat_1_v5_gn_7_23521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 30942216-30942715 Lactuca sativa
Lsat_1_v5_gn_7_23521 0.5kb downstream 0.5kb downstream 3559   true Lsat_1_v8_lg_7: 30942716-30946274 Lactuca sativa
Lsat_1_v5_gn_7_23521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 30945775-30946274 Lactuca sativa
Lsat_1_v5_gn_7_23521 1.0kb upstream 1.0kb upstream 4059   true Lsat_1_v8_lg_7: 30941716-30945774 Lactuca sativa
Lsat_1_v5_gn_7_23521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 30941716-30942715 Lactuca sativa
Lsat_1_v5_gn_7_23521 1.0kb downstream 1.0kb downstream 4059   true Lsat_1_v8_lg_7: 30942716-30946774 Lactuca sativa
Lsat_1_v5_gn_7_23521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 30945775-30946774 Lactuca sativa
Lsat_1_v5_gn_7_23521 2.0kb upstream 2.0kb upstream 5059   true Lsat_1_v8_lg_7: 30940716-30945774 Lactuca sativa
Lsat_1_v5_gn_7_23521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 30940716-30942715 Lactuca sativa
Lsat_1_v5_gn_7_23521 2.0kb downstream 2.0kb downstream 5059   true Lsat_1_v8_lg_7: 30942716-30947774 Lactuca sativa
Lsat_1_v5_gn_7_23521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 30945775-30947774 Lactuca sativa
Lsat_1_v5_gn_7_23521 5.0kb upstream 5.0kb upstream 8059   true Lsat_1_v8_lg_7: 30937716-30945774 Lactuca sativa
Lsat_1_v5_gn_7_23521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 30937716-30942715 Lactuca sativa
Lsat_1_v5_gn_7_23521 5.0kb downstream 5.0kb downstream 8059   true Lsat_1_v8_lg_7: 30942716-30950774 Lactuca sativa
Lsat_1_v5_gn_7_23521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 30945775-30950774 Lactuca sativa
Lsat_1_v5_gn_7_23521 10.0kb upstream 10.0kb upstream 13059   true Lsat_1_v8_lg_7: 30932716-30945774 Lactuca sativa
Lsat_1_v5_gn_7_23521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 30932716-30942715 Lactuca sativa
Lsat_1_v5_gn_7_23521 10.0kb downstream 10.0kb downstream 13059   true Lsat_1_v8_lg_7: 30942716-30955774 Lactuca sativa
Lsat_1_v5_gn_7_23521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 30945775-30955774 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474625 5263 Asterids View MSA
123747288 5271 Pentapetalae View MSA
122787986 5272 Eudicot View MSA
122046309 5273 Angiosperm View MSA
121351059 5274 Embryophyte View MSA
123427435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain