Gene : Lsat_1_v5_gn_7_26140 L. sativa V8
Defline:  (1 of 3) KOG1118 - Lysophosphatidic acid acyltransferase endophilin/SH3GL, involved in synaptic vesicle formation Genomic Order:  897
Name:  ? Lsat_1_v5_gn_7_26140 Secondary Identifier:  ? PAC:38911338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_26140 0.5kb upstream 0.5kb upstream 3846   true Lsat_1_v8_lg_7: 36463177-36467022 Lactuca sativa
Lsat_1_v5_gn_7_26140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 36466523-36467022 Lactuca sativa
Lsat_1_v5_gn_7_26140 0.5kb downstream 0.5kb downstream 3846   true Lsat_1_v8_lg_7: 36462677-36466522 Lactuca sativa
Lsat_1_v5_gn_7_26140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 36462677-36463176 Lactuca sativa
Lsat_1_v5_gn_7_26140 1.0kb upstream 1.0kb upstream 4346   true Lsat_1_v8_lg_7: 36463177-36467522 Lactuca sativa
Lsat_1_v5_gn_7_26140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 36466523-36467522 Lactuca sativa
Lsat_1_v5_gn_7_26140 1.0kb downstream 1.0kb downstream 4346   true Lsat_1_v8_lg_7: 36462177-36466522 Lactuca sativa
Lsat_1_v5_gn_7_26140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 36462177-36463176 Lactuca sativa
Lsat_1_v5_gn_7_26140 2.0kb upstream 2.0kb upstream 5346   true Lsat_1_v8_lg_7: 36463177-36468522 Lactuca sativa
Lsat_1_v5_gn_7_26140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 36466523-36468522 Lactuca sativa
Lsat_1_v5_gn_7_26140 2.0kb downstream 2.0kb downstream 5346   true Lsat_1_v8_lg_7: 36461177-36466522 Lactuca sativa
Lsat_1_v5_gn_7_26140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 36461177-36463176 Lactuca sativa
Lsat_1_v5_gn_7_26140 5.0kb upstream 5.0kb upstream 8346   true Lsat_1_v8_lg_7: 36463177-36471522 Lactuca sativa
Lsat_1_v5_gn_7_26140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 36466523-36471522 Lactuca sativa
Lsat_1_v5_gn_7_26140 5.0kb downstream 5.0kb downstream 8346   true Lsat_1_v8_lg_7: 36458177-36466522 Lactuca sativa
Lsat_1_v5_gn_7_26140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 36458177-36463176 Lactuca sativa
Lsat_1_v5_gn_7_26140 10.0kb upstream 10.0kb upstream 13346   true Lsat_1_v8_lg_7: 36463177-36476522 Lactuca sativa
Lsat_1_v5_gn_7_26140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 36466523-36476522 Lactuca sativa
Lsat_1_v5_gn_7_26140 10.0kb downstream 10.0kb downstream 13346   true Lsat_1_v8_lg_7: 36453177-36466522 Lactuca sativa
Lsat_1_v5_gn_7_26140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 36453177-36463176 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470877 5263 Asterids View MSA
123745514 5271 Pentapetalae View MSA
122793462 5272 Eudicot View MSA
122043721 5273 Angiosperm View MSA
121310176 5274 Embryophyte View MSA
123347741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain