Gene : Lsat_1_v5_gn_7_25900 L. sativa V8
Defline:  (1 of 6) K03935 - NADH dehydrogenase (ubiquinone) Fe-S protein 2 (NDUFS2) Genomic Order:  836
Name:  ? Lsat_1_v5_gn_7_25900 Secondary Identifier:  ? PAC:38912938
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3781 Lactuca sativa pathologic  
Lsativa PWY-4302 Lactuca sativa pathologic  
Lsativa PWY-5083 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_25900 0.5kb upstream 0.5kb upstream 791   true Lsat_1_v8_lg_7: 33410270-33411060 Lactuca sativa
Lsat_1_v5_gn_7_25900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 33410561-33411060 Lactuca sativa
Lsat_1_v5_gn_7_25900 0.5kb downstream 0.5kb downstream 791   true Lsat_1_v8_lg_7: 33409770-33410560 Lactuca sativa
Lsat_1_v5_gn_7_25900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 33409770-33410269 Lactuca sativa
Lsat_1_v5_gn_7_25900 1.0kb upstream 1.0kb upstream 1291   true Lsat_1_v8_lg_7: 33410270-33411560 Lactuca sativa
Lsat_1_v5_gn_7_25900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 33410561-33411560 Lactuca sativa
Lsat_1_v5_gn_7_25900 1.0kb downstream 1.0kb downstream 1291   true Lsat_1_v8_lg_7: 33409270-33410560 Lactuca sativa
Lsat_1_v5_gn_7_25900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 33409270-33410269 Lactuca sativa
Lsat_1_v5_gn_7_25900 2.0kb upstream 2.0kb upstream 2291   true Lsat_1_v8_lg_7: 33410270-33412560 Lactuca sativa
Lsat_1_v5_gn_7_25900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 33410561-33412560 Lactuca sativa
Lsat_1_v5_gn_7_25900 2.0kb downstream 2.0kb downstream 2291   true Lsat_1_v8_lg_7: 33408270-33410560 Lactuca sativa
Lsat_1_v5_gn_7_25900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 33408270-33410269 Lactuca sativa
Lsat_1_v5_gn_7_25900 5.0kb upstream 5.0kb upstream 5291   true Lsat_1_v8_lg_7: 33410270-33415560 Lactuca sativa
Lsat_1_v5_gn_7_25900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 33410561-33415560 Lactuca sativa
Lsat_1_v5_gn_7_25900 5.0kb downstream 5.0kb downstream 5291   true Lsat_1_v8_lg_7: 33405270-33410560 Lactuca sativa
Lsat_1_v5_gn_7_25900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 33405270-33410269 Lactuca sativa
Lsat_1_v5_gn_7_25900 10.0kb upstream 10.0kb upstream 10291   true Lsat_1_v8_lg_7: 33410270-33420560 Lactuca sativa
Lsat_1_v5_gn_7_25900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 33410561-33420560 Lactuca sativa
Lsat_1_v5_gn_7_25900 10.0kb downstream 10.0kb downstream 10291   true Lsat_1_v8_lg_7: 33400270-33410560 Lactuca sativa
Lsat_1_v5_gn_7_25900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 33400270-33410269 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026692 5273 Angiosperm View MSA
121479974 5263 Asterids View MSA
123750538 5271 Pentapetalae View MSA
122773711 5272 Eudicot View MSA
121350081 5274 Embryophyte View MSA
123381572 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain