Gene : Lsat_1_v5_gn_7_27220 L. sativa V8
Defline:  (1 of 1) PTHR10217//PTHR10217:SF520 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // SUBFAMILY NOT NAMED Genomic Order:  903
Name:  ? Lsat_1_v5_gn_7_27220 Secondary Identifier:  ? PAC:38912611
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_27220 0.5kb upstream 0.5kb upstream 5001   true Lsat_1_v8_lg_7: 36838667-36843667 Lactuca sativa
Lsat_1_v5_gn_7_27220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 36838667-36839166 Lactuca sativa
Lsat_1_v5_gn_7_27220 0.5kb downstream 0.5kb downstream 5001   true Lsat_1_v8_lg_7: 36839167-36844167 Lactuca sativa
Lsat_1_v5_gn_7_27220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 36843668-36844167 Lactuca sativa
Lsat_1_v5_gn_7_27220 1.0kb upstream 1.0kb upstream 5501   true Lsat_1_v8_lg_7: 36838167-36843667 Lactuca sativa
Lsat_1_v5_gn_7_27220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 36838167-36839166 Lactuca sativa
Lsat_1_v5_gn_7_27220 1.0kb downstream 1.0kb downstream 5501   true Lsat_1_v8_lg_7: 36839167-36844667 Lactuca sativa
Lsat_1_v5_gn_7_27220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 36843668-36844667 Lactuca sativa
Lsat_1_v5_gn_7_27220 2.0kb upstream 2.0kb upstream 6501   true Lsat_1_v8_lg_7: 36837167-36843667 Lactuca sativa
Lsat_1_v5_gn_7_27220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 36837167-36839166 Lactuca sativa
Lsat_1_v5_gn_7_27220 2.0kb downstream 2.0kb downstream 6501   true Lsat_1_v8_lg_7: 36839167-36845667 Lactuca sativa
Lsat_1_v5_gn_7_27220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 36843668-36845667 Lactuca sativa
Lsat_1_v5_gn_7_27220 5.0kb upstream 5.0kb upstream 9501   true Lsat_1_v8_lg_7: 36834167-36843667 Lactuca sativa
Lsat_1_v5_gn_7_27220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 36834167-36839166 Lactuca sativa
Lsat_1_v5_gn_7_27220 5.0kb downstream 5.0kb downstream 9501   true Lsat_1_v8_lg_7: 36839167-36848667 Lactuca sativa
Lsat_1_v5_gn_7_27220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 36843668-36848667 Lactuca sativa
Lsat_1_v5_gn_7_27220 10.0kb upstream 10.0kb upstream 14501   true Lsat_1_v8_lg_7: 36829167-36843667 Lactuca sativa
Lsat_1_v5_gn_7_27220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 36829167-36839166 Lactuca sativa
Lsat_1_v5_gn_7_27220 10.0kb downstream 10.0kb downstream 14501   true Lsat_1_v8_lg_7: 36839167-36853667 Lactuca sativa
Lsat_1_v5_gn_7_27220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 36843668-36853667 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480320 5263 Asterids View MSA
123736390 5271 Pentapetalae View MSA
122788335 5272 Eudicot View MSA
122043816 5273 Angiosperm View MSA
121310193 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain