Gene : Lsat_1_v5_gn_7_27781 L. sativa V8
Defline:  (1 of 1) PTHR31072:SF2 - TRANSCRIPTION FACTOR TCP2-RELATED Genomic Order:  924
Name:  ? Lsat_1_v5_gn_7_27781 Secondary Identifier:  ? PAC:38913610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_27781 0.5kb upstream 0.5kb upstream 4452   true Lsat_1_v8_lg_7: 37469084-37473535 Lactuca sativa
Lsat_1_v5_gn_7_27781 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 37473036-37473535 Lactuca sativa
Lsat_1_v5_gn_7_27781 0.5kb downstream 0.5kb downstream 4452   true Lsat_1_v8_lg_7: 37468584-37473035 Lactuca sativa
Lsat_1_v5_gn_7_27781 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 37468584-37469083 Lactuca sativa
Lsat_1_v5_gn_7_27781 1.0kb upstream 1.0kb upstream 4952   true Lsat_1_v8_lg_7: 37469084-37474035 Lactuca sativa
Lsat_1_v5_gn_7_27781 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 37473036-37474035 Lactuca sativa
Lsat_1_v5_gn_7_27781 1.0kb downstream 1.0kb downstream 4952   true Lsat_1_v8_lg_7: 37468084-37473035 Lactuca sativa
Lsat_1_v5_gn_7_27781 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 37468084-37469083 Lactuca sativa
Lsat_1_v5_gn_7_27781 2.0kb upstream 2.0kb upstream 5952   true Lsat_1_v8_lg_7: 37469084-37475035 Lactuca sativa
Lsat_1_v5_gn_7_27781 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 37473036-37475035 Lactuca sativa
Lsat_1_v5_gn_7_27781 2.0kb downstream 2.0kb downstream 5952   true Lsat_1_v8_lg_7: 37467084-37473035 Lactuca sativa
Lsat_1_v5_gn_7_27781 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 37467084-37469083 Lactuca sativa
Lsat_1_v5_gn_7_27781 5.0kb upstream 5.0kb upstream 8952   true Lsat_1_v8_lg_7: 37469084-37478035 Lactuca sativa
Lsat_1_v5_gn_7_27781 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 37473036-37478035 Lactuca sativa
Lsat_1_v5_gn_7_27781 5.0kb downstream 5.0kb downstream 8952   true Lsat_1_v8_lg_7: 37464084-37473035 Lactuca sativa
Lsat_1_v5_gn_7_27781 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 37464084-37469083 Lactuca sativa
Lsat_1_v5_gn_7_27781 10.0kb upstream 10.0kb upstream 13952   true Lsat_1_v8_lg_7: 37469084-37483035 Lactuca sativa
Lsat_1_v5_gn_7_27781 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 37473036-37483035 Lactuca sativa
Lsat_1_v5_gn_7_27781 10.0kb downstream 10.0kb downstream 13952   true Lsat_1_v8_lg_7: 37459084-37473035 Lactuca sativa
Lsat_1_v5_gn_7_27781 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 37459084-37469083 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470309 5263 Asterids View MSA
123743584 5271 Pentapetalae View MSA
122787368 5272 Eudicot View MSA
122042527 5273 Angiosperm View MSA
121350950 5274 Embryophyte View MSA
123381946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain