Gene : Lsat_1_v5_gn_7_31160 L. sativa V8
Defline:  (1 of 26) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1015
Name:  ? Lsat_1_v5_gn_7_31160 Secondary Identifier:  ? PAC:38914488
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_31160 0.5kb upstream 0.5kb upstream 4909   true Lsat_1_v8_lg_7: 42313630-42318538 Lactuca sativa
Lsat_1_v5_gn_7_31160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 42318039-42318538 Lactuca sativa
Lsat_1_v5_gn_7_31160 0.5kb downstream 0.5kb downstream 4909   true Lsat_1_v8_lg_7: 42313130-42318038 Lactuca sativa
Lsat_1_v5_gn_7_31160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 42313130-42313629 Lactuca sativa
Lsat_1_v5_gn_7_31160 1.0kb upstream 1.0kb upstream 5409   true Lsat_1_v8_lg_7: 42313630-42319038 Lactuca sativa
Lsat_1_v5_gn_7_31160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 42318039-42319038 Lactuca sativa
Lsat_1_v5_gn_7_31160 1.0kb downstream 1.0kb downstream 5409   true Lsat_1_v8_lg_7: 42312630-42318038 Lactuca sativa
Lsat_1_v5_gn_7_31160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 42312630-42313629 Lactuca sativa
Lsat_1_v5_gn_7_31160 2.0kb upstream 2.0kb upstream 6409   true Lsat_1_v8_lg_7: 42313630-42320038 Lactuca sativa
Lsat_1_v5_gn_7_31160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 42318039-42320038 Lactuca sativa
Lsat_1_v5_gn_7_31160 2.0kb downstream 2.0kb downstream 6409   true Lsat_1_v8_lg_7: 42311630-42318038 Lactuca sativa
Lsat_1_v5_gn_7_31160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 42311630-42313629 Lactuca sativa
Lsat_1_v5_gn_7_31160 5.0kb upstream 5.0kb upstream 9409   true Lsat_1_v8_lg_7: 42313630-42323038 Lactuca sativa
Lsat_1_v5_gn_7_31160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 42318039-42323038 Lactuca sativa
Lsat_1_v5_gn_7_31160 5.0kb downstream 5.0kb downstream 9409   true Lsat_1_v8_lg_7: 42308630-42318038 Lactuca sativa
Lsat_1_v5_gn_7_31160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 42308630-42313629 Lactuca sativa
Lsat_1_v5_gn_7_31160 10.0kb upstream 10.0kb upstream 14409   true Lsat_1_v8_lg_7: 42313630-42328038 Lactuca sativa
Lsat_1_v5_gn_7_31160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 42318039-42328038 Lactuca sativa
Lsat_1_v5_gn_7_31160 10.0kb downstream 10.0kb downstream 14409   true Lsat_1_v8_lg_7: 42303630-42318038 Lactuca sativa
Lsat_1_v5_gn_7_31160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 42303630-42313629 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474183 5263 Asterids View MSA
123740416 5271 Pentapetalae View MSA
122793114 5272 Eudicot View MSA
122046069 5273 Angiosperm View MSA
121347106 5274 Embryophyte View MSA
123380493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain