Gene : Lsat_1_v5_gn_7_105721 L. sativa V8
Defline:  (1 of 2) PF11817//PF12584 - Foie gras liver health family 1 (Foie-gras_1) // Trafficking protein particle complex subunit 10, TRAPPC10 (TRAPPC10) Genomic Order:  3150
Name:  ? Lsat_1_v5_gn_7_105721 Secondary Identifier:  ? PAC:38911398
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_105721 0.5kb upstream 0.5kb upstream 6451   true Lsat_1_v8_lg_7: 179048389-179054839 Lactuca sativa
Lsat_1_v5_gn_7_105721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 179048389-179048888 Lactuca sativa
Lsat_1_v5_gn_7_105721 0.5kb downstream 0.5kb downstream 6451   true Lsat_1_v8_lg_7: 179048889-179055339 Lactuca sativa
Lsat_1_v5_gn_7_105721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 179054840-179055339 Lactuca sativa
Lsat_1_v5_gn_7_105721 1.0kb upstream 1.0kb upstream 6951   true Lsat_1_v8_lg_7: 179047889-179054839 Lactuca sativa
Lsat_1_v5_gn_7_105721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 179047889-179048888 Lactuca sativa
Lsat_1_v5_gn_7_105721 1.0kb downstream 1.0kb downstream 6951   true Lsat_1_v8_lg_7: 179048889-179055839 Lactuca sativa
Lsat_1_v5_gn_7_105721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 179054840-179055839 Lactuca sativa
Lsat_1_v5_gn_7_105721 2.0kb upstream 2.0kb upstream 7951   true Lsat_1_v8_lg_7: 179046889-179054839 Lactuca sativa
Lsat_1_v5_gn_7_105721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 179046889-179048888 Lactuca sativa
Lsat_1_v5_gn_7_105721 2.0kb downstream 2.0kb downstream 7951   true Lsat_1_v8_lg_7: 179048889-179056839 Lactuca sativa
Lsat_1_v5_gn_7_105721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 179054840-179056839 Lactuca sativa
Lsat_1_v5_gn_7_105721 5.0kb upstream 5.0kb upstream 10951   true Lsat_1_v8_lg_7: 179043889-179054839 Lactuca sativa
Lsat_1_v5_gn_7_105721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 179043889-179048888 Lactuca sativa
Lsat_1_v5_gn_7_105721 5.0kb downstream 5.0kb downstream 10951   true Lsat_1_v8_lg_7: 179048889-179059839 Lactuca sativa
Lsat_1_v5_gn_7_105721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 179054840-179059839 Lactuca sativa
Lsat_1_v5_gn_7_105721 10.0kb upstream 10.0kb upstream 15951   true Lsat_1_v8_lg_7: 179038889-179054839 Lactuca sativa
Lsat_1_v5_gn_7_105721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 179038889-179048888 Lactuca sativa
Lsat_1_v5_gn_7_105721 10.0kb downstream 10.0kb downstream 15951   true Lsat_1_v8_lg_7: 179048889-179064839 Lactuca sativa
Lsat_1_v5_gn_7_105721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 179054840-179064839 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476683 5263 Asterids View MSA
123747515 5271 Pentapetalae View MSA
122790738 5272 Eudicot View MSA
122046287 5273 Angiosperm View MSA
121348694 5274 Embryophyte View MSA
123380976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain