Gene : Lsat_1_v5_gn_7_107800 L. sativa V8
Defline:  (1 of 1) PTHR10353:SF46 - BETA-GLUCOSIDASE 41-RELATED Genomic Order:  3215
Name:  ? Lsat_1_v5_gn_7_107800 Secondary Identifier:  ? PAC:38912726
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-3121 Lactuca sativa pathologic  
Lsativa PWY-5176 Lactuca sativa pathologic  
Lsativa PWY-6002 Lactuca sativa pathologic  
Lsativa PWY-7089 Lactuca sativa pathologic  
Lsativa PWY-7091 Lactuca sativa pathologic  
Lsativa PWY-7092 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_107800 0.5kb upstream 0.5kb upstream 3792   true Lsat_1_v8_lg_7: 181954259-181958050 Lactuca sativa
Lsat_1_v5_gn_7_107800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 181957551-181958050 Lactuca sativa
Lsat_1_v5_gn_7_107800 0.5kb downstream 0.5kb downstream 3792   true Lsat_1_v8_lg_7: 181953759-181957550 Lactuca sativa
Lsat_1_v5_gn_7_107800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 181953759-181954258 Lactuca sativa
Lsat_1_v5_gn_7_107800 1.0kb upstream 1.0kb upstream 4292   true Lsat_1_v8_lg_7: 181954259-181958550 Lactuca sativa
Lsat_1_v5_gn_7_107800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 181957551-181958550 Lactuca sativa
Lsat_1_v5_gn_7_107800 1.0kb downstream 1.0kb downstream 4292   true Lsat_1_v8_lg_7: 181953259-181957550 Lactuca sativa
Lsat_1_v5_gn_7_107800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 181953259-181954258 Lactuca sativa
Lsat_1_v5_gn_7_107800 2.0kb upstream 2.0kb upstream 5292   true Lsat_1_v8_lg_7: 181954259-181959550 Lactuca sativa
Lsat_1_v5_gn_7_107800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 181957551-181959550 Lactuca sativa
Lsat_1_v5_gn_7_107800 2.0kb downstream 2.0kb downstream 5292   true Lsat_1_v8_lg_7: 181952259-181957550 Lactuca sativa
Lsat_1_v5_gn_7_107800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 181952259-181954258 Lactuca sativa
Lsat_1_v5_gn_7_107800 5.0kb upstream 5.0kb upstream 8292   true Lsat_1_v8_lg_7: 181954259-181962550 Lactuca sativa
Lsat_1_v5_gn_7_107800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 181957551-181962550 Lactuca sativa
Lsat_1_v5_gn_7_107800 5.0kb downstream 5.0kb downstream 8292   true Lsat_1_v8_lg_7: 181949259-181957550 Lactuca sativa
Lsat_1_v5_gn_7_107800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 181949259-181954258 Lactuca sativa
Lsat_1_v5_gn_7_107800 10.0kb upstream 10.0kb upstream 13292   true Lsat_1_v8_lg_7: 181954259-181967550 Lactuca sativa
Lsat_1_v5_gn_7_107800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 181957551-181967550 Lactuca sativa
Lsat_1_v5_gn_7_107800 10.0kb downstream 10.0kb downstream 13292   true Lsat_1_v8_lg_7: 181944259-181957550 Lactuca sativa
Lsat_1_v5_gn_7_107800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 181944259-181954258 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469849 5263 Asterids View MSA
123738242 5271 Pentapetalae View MSA
122788523 5272 Eudicot View MSA
122050283 5273 Angiosperm View MSA
121350182 5274 Embryophyte View MSA
123428830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain