Gene : Lsat_1_v5_gn_7_107680 L. sativa V8
Defline:  (1 of 72) PF03514 - GRAS domain family (GRAS) Genomic Order:  3219
Name:  ? Lsat_1_v5_gn_7_107680 Secondary Identifier:  ? PAC:38914591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_107680 0.5kb upstream 0.5kb upstream 3042   true Lsat_1_v8_lg_7: 182067540-182070581 Lactuca sativa
Lsat_1_v5_gn_7_107680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 182070082-182070581 Lactuca sativa
Lsat_1_v5_gn_7_107680 0.5kb downstream 0.5kb downstream 3042   true Lsat_1_v8_lg_7: 182067040-182070081 Lactuca sativa
Lsat_1_v5_gn_7_107680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 182067040-182067539 Lactuca sativa
Lsat_1_v5_gn_7_107680 1.0kb upstream 1.0kb upstream 3542   true Lsat_1_v8_lg_7: 182067540-182071081 Lactuca sativa
Lsat_1_v5_gn_7_107680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 182070082-182071081 Lactuca sativa
Lsat_1_v5_gn_7_107680 1.0kb downstream 1.0kb downstream 3542   true Lsat_1_v8_lg_7: 182066540-182070081 Lactuca sativa
Lsat_1_v5_gn_7_107680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 182066540-182067539 Lactuca sativa
Lsat_1_v5_gn_7_107680 2.0kb upstream 2.0kb upstream 4542   true Lsat_1_v8_lg_7: 182067540-182072081 Lactuca sativa
Lsat_1_v5_gn_7_107680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 182070082-182072081 Lactuca sativa
Lsat_1_v5_gn_7_107680 2.0kb downstream 2.0kb downstream 4542   true Lsat_1_v8_lg_7: 182065540-182070081 Lactuca sativa
Lsat_1_v5_gn_7_107680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 182065540-182067539 Lactuca sativa
Lsat_1_v5_gn_7_107680 5.0kb upstream 5.0kb upstream 7542   true Lsat_1_v8_lg_7: 182067540-182075081 Lactuca sativa
Lsat_1_v5_gn_7_107680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 182070082-182075081 Lactuca sativa
Lsat_1_v5_gn_7_107680 5.0kb downstream 5.0kb downstream 7542   true Lsat_1_v8_lg_7: 182062540-182070081 Lactuca sativa
Lsat_1_v5_gn_7_107680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 182062540-182067539 Lactuca sativa
Lsat_1_v5_gn_7_107680 10.0kb upstream 10.0kb upstream 12542   true Lsat_1_v8_lg_7: 182067540-182080081 Lactuca sativa
Lsat_1_v5_gn_7_107680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 182070082-182080081 Lactuca sativa
Lsat_1_v5_gn_7_107680 10.0kb downstream 10.0kb downstream 12542   true Lsat_1_v8_lg_7: 182057540-182070081 Lactuca sativa
Lsat_1_v5_gn_7_107680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 182057540-182067539 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480278 5263 Asterids View MSA
123743209 5271 Pentapetalae View MSA
122794651 5272 Eudicot View MSA
122048977 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain