Gene : Lsat_1_v5_gn_7_1081 L. sativa V8
Defline:  (1 of 3) PTHR10666:SF134 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 2 Genomic Order:  32
Name:  ? Lsat_1_v5_gn_7_1081 Secondary Identifier:  ? PAC:38914895
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6351 Lactuca sativa pathologic  
Lsativa PWY-6352 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_1081 0.5kb upstream 0.5kb upstream 3987   true Lsat_1_v8_lg_7: 2243998-2247984 Lactuca sativa
Lsat_1_v5_gn_7_1081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 2247485-2247984 Lactuca sativa
Lsat_1_v5_gn_7_1081 0.5kb downstream 0.5kb downstream 3987   true Lsat_1_v8_lg_7: 2243498-2247484 Lactuca sativa
Lsat_1_v5_gn_7_1081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 2243498-2243997 Lactuca sativa
Lsat_1_v5_gn_7_1081 1.0kb upstream 1.0kb upstream 4487   true Lsat_1_v8_lg_7: 2243998-2248484 Lactuca sativa
Lsat_1_v5_gn_7_1081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 2247485-2248484 Lactuca sativa
Lsat_1_v5_gn_7_1081 1.0kb downstream 1.0kb downstream 4487   true Lsat_1_v8_lg_7: 2242998-2247484 Lactuca sativa
Lsat_1_v5_gn_7_1081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 2242998-2243997 Lactuca sativa
Lsat_1_v5_gn_7_1081 2.0kb upstream 2.0kb upstream 5487   true Lsat_1_v8_lg_7: 2243998-2249484 Lactuca sativa
Lsat_1_v5_gn_7_1081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 2247485-2249484 Lactuca sativa
Lsat_1_v5_gn_7_1081 2.0kb downstream 2.0kb downstream 5487   true Lsat_1_v8_lg_7: 2241998-2247484 Lactuca sativa
Lsat_1_v5_gn_7_1081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 2241998-2243997 Lactuca sativa
Lsat_1_v5_gn_7_1081 5.0kb upstream 5.0kb upstream 8487   true Lsat_1_v8_lg_7: 2243998-2252484 Lactuca sativa
Lsat_1_v5_gn_7_1081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 2247485-2252484 Lactuca sativa
Lsat_1_v5_gn_7_1081 5.0kb downstream 5.0kb downstream 8487   true Lsat_1_v8_lg_7: 2238998-2247484 Lactuca sativa
Lsat_1_v5_gn_7_1081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 2238998-2243997 Lactuca sativa
Lsat_1_v5_gn_7_1081 10.0kb upstream 10.0kb upstream 13487   true Lsat_1_v8_lg_7: 2243998-2257484 Lactuca sativa
Lsat_1_v5_gn_7_1081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 2247485-2257484 Lactuca sativa
Lsat_1_v5_gn_7_1081 10.0kb downstream 10.0kb downstream 13487   true Lsat_1_v8_lg_7: 2233998-2247484 Lactuca sativa
Lsat_1_v5_gn_7_1081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 2233998-2243997 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470007 5263 Asterids View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain