Gene : Lsat_1_v5_gn_7_108700 L. sativa V8
Defline:  (1 of 2) PTHR22835//PTHR22835:SF170 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3272
Name:  ? Lsat_1_v5_gn_7_108700 Secondary Identifier:  ? PAC:38912009
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_108700 0.5kb upstream 0.5kb upstream 2568   true Lsat_1_v8_lg_7: 183842361-183844928 Lactuca sativa
Lsat_1_v5_gn_7_108700 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 183844429-183844928 Lactuca sativa
Lsat_1_v5_gn_7_108700 0.5kb downstream 0.5kb downstream 2568   true Lsat_1_v8_lg_7: 183841861-183844428 Lactuca sativa
Lsat_1_v5_gn_7_108700 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 183841861-183842360 Lactuca sativa
Lsat_1_v5_gn_7_108700 1.0kb upstream 1.0kb upstream 3068   true Lsat_1_v8_lg_7: 183842361-183845428 Lactuca sativa
Lsat_1_v5_gn_7_108700 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 183844429-183845428 Lactuca sativa
Lsat_1_v5_gn_7_108700 1.0kb downstream 1.0kb downstream 3068   true Lsat_1_v8_lg_7: 183841361-183844428 Lactuca sativa
Lsat_1_v5_gn_7_108700 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 183841361-183842360 Lactuca sativa
Lsat_1_v5_gn_7_108700 2.0kb upstream 2.0kb upstream 4068   true Lsat_1_v8_lg_7: 183842361-183846428 Lactuca sativa
Lsat_1_v5_gn_7_108700 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 183844429-183846428 Lactuca sativa
Lsat_1_v5_gn_7_108700 2.0kb downstream 2.0kb downstream 4068   true Lsat_1_v8_lg_7: 183840361-183844428 Lactuca sativa
Lsat_1_v5_gn_7_108700 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 183840361-183842360 Lactuca sativa
Lsat_1_v5_gn_7_108700 5.0kb upstream 5.0kb upstream 7068   true Lsat_1_v8_lg_7: 183842361-183849428 Lactuca sativa
Lsat_1_v5_gn_7_108700 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 183844429-183849428 Lactuca sativa
Lsat_1_v5_gn_7_108700 5.0kb downstream 5.0kb downstream 7068   true Lsat_1_v8_lg_7: 183837361-183844428 Lactuca sativa
Lsat_1_v5_gn_7_108700 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 183837361-183842360 Lactuca sativa
Lsat_1_v5_gn_7_108700 10.0kb upstream 10.0kb upstream 12068   true Lsat_1_v8_lg_7: 183842361-183854428 Lactuca sativa
Lsat_1_v5_gn_7_108700 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 183844429-183854428 Lactuca sativa
Lsat_1_v5_gn_7_108700 10.0kb downstream 10.0kb downstream 12068   true Lsat_1_v8_lg_7: 183832361-183844428 Lactuca sativa
Lsat_1_v5_gn_7_108700 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 183832361-183842360 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479377 5263 Asterids View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain