Gene : Lsat_1_v5_gn_7_108641 L. sativa V8
Defline:  (1 of 1) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3275
Name:  ? Lsat_1_v5_gn_7_108641 Secondary Identifier:  ? PAC:38912545
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_108641 0.5kb upstream 0.5kb upstream 4693   true Lsat_1_v8_lg_7: 183858556-183863248 Lactuca sativa
Lsat_1_v5_gn_7_108641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 183858556-183859055 Lactuca sativa
Lsat_1_v5_gn_7_108641 0.5kb downstream 0.5kb downstream 4693   true Lsat_1_v8_lg_7: 183859056-183863748 Lactuca sativa
Lsat_1_v5_gn_7_108641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 183863249-183863748 Lactuca sativa
Lsat_1_v5_gn_7_108641 1.0kb upstream 1.0kb upstream 5193   true Lsat_1_v8_lg_7: 183858056-183863248 Lactuca sativa
Lsat_1_v5_gn_7_108641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 183858056-183859055 Lactuca sativa
Lsat_1_v5_gn_7_108641 1.0kb downstream 1.0kb downstream 5193   true Lsat_1_v8_lg_7: 183859056-183864248 Lactuca sativa
Lsat_1_v5_gn_7_108641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 183863249-183864248 Lactuca sativa
Lsat_1_v5_gn_7_108641 2.0kb upstream 2.0kb upstream 6193   true Lsat_1_v8_lg_7: 183857056-183863248 Lactuca sativa
Lsat_1_v5_gn_7_108641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 183857056-183859055 Lactuca sativa
Lsat_1_v5_gn_7_108641 2.0kb downstream 2.0kb downstream 6193   true Lsat_1_v8_lg_7: 183859056-183865248 Lactuca sativa
Lsat_1_v5_gn_7_108641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 183863249-183865248 Lactuca sativa
Lsat_1_v5_gn_7_108641 5.0kb upstream 5.0kb upstream 9193   true Lsat_1_v8_lg_7: 183854056-183863248 Lactuca sativa
Lsat_1_v5_gn_7_108641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 183854056-183859055 Lactuca sativa
Lsat_1_v5_gn_7_108641 5.0kb downstream 5.0kb downstream 9193   true Lsat_1_v8_lg_7: 183859056-183868248 Lactuca sativa
Lsat_1_v5_gn_7_108641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 183863249-183868248 Lactuca sativa
Lsat_1_v5_gn_7_108641 10.0kb upstream 10.0kb upstream 14193   true Lsat_1_v8_lg_7: 183849056-183863248 Lactuca sativa
Lsat_1_v5_gn_7_108641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 183849056-183859055 Lactuca sativa
Lsat_1_v5_gn_7_108641 10.0kb downstream 10.0kb downstream 14193   true Lsat_1_v8_lg_7: 183859056-183873248 Lactuca sativa
Lsat_1_v5_gn_7_108641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 183863249-183873248 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476165 5263 Asterids View MSA
123736552 5271 Pentapetalae View MSA
122787256 5272 Eudicot View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain