Gene : Lsat_1_v5_gn_7_108921 L. sativa V8
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3263
Name:  ? Lsat_1_v5_gn_7_108921 Secondary Identifier:  ? PAC:38914014
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_108921 0.5kb upstream 0.5kb upstream 5211   true Lsat_1_v8_lg_7: 183684248-183689458 Lactuca sativa
Lsat_1_v5_gn_7_108921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 183684248-183684747 Lactuca sativa
Lsat_1_v5_gn_7_108921 0.5kb downstream 0.5kb downstream 5211   true Lsat_1_v8_lg_7: 183684748-183689958 Lactuca sativa
Lsat_1_v5_gn_7_108921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 183689459-183689958 Lactuca sativa
Lsat_1_v5_gn_7_108921 1.0kb upstream 1.0kb upstream 5711   true Lsat_1_v8_lg_7: 183683748-183689458 Lactuca sativa
Lsat_1_v5_gn_7_108921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 183683748-183684747 Lactuca sativa
Lsat_1_v5_gn_7_108921 1.0kb downstream 1.0kb downstream 5711   true Lsat_1_v8_lg_7: 183684748-183690458 Lactuca sativa
Lsat_1_v5_gn_7_108921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 183689459-183690458 Lactuca sativa
Lsat_1_v5_gn_7_108921 2.0kb upstream 2.0kb upstream 6711   true Lsat_1_v8_lg_7: 183682748-183689458 Lactuca sativa
Lsat_1_v5_gn_7_108921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 183682748-183684747 Lactuca sativa
Lsat_1_v5_gn_7_108921 2.0kb downstream 2.0kb downstream 6711   true Lsat_1_v8_lg_7: 183684748-183691458 Lactuca sativa
Lsat_1_v5_gn_7_108921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 183689459-183691458 Lactuca sativa
Lsat_1_v5_gn_7_108921 5.0kb upstream 5.0kb upstream 9711   true Lsat_1_v8_lg_7: 183679748-183689458 Lactuca sativa
Lsat_1_v5_gn_7_108921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 183679748-183684747 Lactuca sativa
Lsat_1_v5_gn_7_108921 5.0kb downstream 5.0kb downstream 9711   true Lsat_1_v8_lg_7: 183684748-183694458 Lactuca sativa
Lsat_1_v5_gn_7_108921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 183689459-183694458 Lactuca sativa
Lsat_1_v5_gn_7_108921 10.0kb upstream 10.0kb upstream 14711   true Lsat_1_v8_lg_7: 183674748-183689458 Lactuca sativa
Lsat_1_v5_gn_7_108921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 183674748-183684747 Lactuca sativa
Lsat_1_v5_gn_7_108921 10.0kb downstream 10.0kb downstream 14711   true Lsat_1_v8_lg_7: 183684748-183699458 Lactuca sativa
Lsat_1_v5_gn_7_108921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 183689459-183699458 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453378 5263 Asterids View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain