Gene : Lsat_1_v5_gn_7_109881 L. sativa V8
Defline:  (1 of 3) PTHR11214//PTHR11214:SF5 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  3286
Name:  ? Lsat_1_v5_gn_7_109881 Secondary Identifier:  ? PAC:38913958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_109881 0.5kb upstream 0.5kb upstream 3783   true Lsat_1_v8_lg_7: 184216094-184219876 Lactuca sativa
Lsat_1_v5_gn_7_109881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 184216094-184216593 Lactuca sativa
Lsat_1_v5_gn_7_109881 0.5kb downstream 0.5kb downstream 3783   true Lsat_1_v8_lg_7: 184216594-184220376 Lactuca sativa
Lsat_1_v5_gn_7_109881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 184219877-184220376 Lactuca sativa
Lsat_1_v5_gn_7_109881 1.0kb upstream 1.0kb upstream 4283   true Lsat_1_v8_lg_7: 184215594-184219876 Lactuca sativa
Lsat_1_v5_gn_7_109881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 184215594-184216593 Lactuca sativa
Lsat_1_v5_gn_7_109881 1.0kb downstream 1.0kb downstream 4283   true Lsat_1_v8_lg_7: 184216594-184220876 Lactuca sativa
Lsat_1_v5_gn_7_109881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 184219877-184220876 Lactuca sativa
Lsat_1_v5_gn_7_109881 2.0kb upstream 2.0kb upstream 5283   true Lsat_1_v8_lg_7: 184214594-184219876 Lactuca sativa
Lsat_1_v5_gn_7_109881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 184214594-184216593 Lactuca sativa
Lsat_1_v5_gn_7_109881 2.0kb downstream 2.0kb downstream 5283   true Lsat_1_v8_lg_7: 184216594-184221876 Lactuca sativa
Lsat_1_v5_gn_7_109881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 184219877-184221876 Lactuca sativa
Lsat_1_v5_gn_7_109881 5.0kb upstream 5.0kb upstream 8283   true Lsat_1_v8_lg_7: 184211594-184219876 Lactuca sativa
Lsat_1_v5_gn_7_109881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 184211594-184216593 Lactuca sativa
Lsat_1_v5_gn_7_109881 5.0kb downstream 5.0kb downstream 8283   true Lsat_1_v8_lg_7: 184216594-184224876 Lactuca sativa
Lsat_1_v5_gn_7_109881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 184219877-184224876 Lactuca sativa
Lsat_1_v5_gn_7_109881 10.0kb upstream 10.0kb upstream 13283   true Lsat_1_v8_lg_7: 184206594-184219876 Lactuca sativa
Lsat_1_v5_gn_7_109881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 184206594-184216593 Lactuca sativa
Lsat_1_v5_gn_7_109881 10.0kb downstream 10.0kb downstream 13283   true Lsat_1_v8_lg_7: 184216594-184229876 Lactuca sativa
Lsat_1_v5_gn_7_109881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 184219877-184229876 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466969 5263 Asterids View MSA
123747291 5271 Pentapetalae View MSA
122789444 5272 Eudicot View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain