Gene : Lsat_1_v5_gn_7_110780 L. sativa V8
Defline:  (1 of 1) PTHR10836//PTHR10836:SF46//PTHR11528//PTHR11528:SF48 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED // HEAT SHOCK PROTEIN 90 // HEAT SHOCK PROTEIN 90-2-RELATED Genomic Order:  3308
Name:  ? Lsat_1_v5_gn_7_110780 Secondary Identifier:  ? PAC:38911857
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa SUCSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_110780 0.5kb upstream 0.5kb upstream 18814   true Lsat_1_v8_lg_7: 185289835-185308648 Lactuca sativa
Lsat_1_v5_gn_7_110780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 185308149-185308648 Lactuca sativa
Lsat_1_v5_gn_7_110780 0.5kb downstream 0.5kb downstream 18814   true Lsat_1_v8_lg_7: 185289335-185308148 Lactuca sativa
Lsat_1_v5_gn_7_110780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 185289335-185289834 Lactuca sativa
Lsat_1_v5_gn_7_110780 1.0kb upstream 1.0kb upstream 19314   true Lsat_1_v8_lg_7: 185289835-185309148 Lactuca sativa
Lsat_1_v5_gn_7_110780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 185308149-185309148 Lactuca sativa
Lsat_1_v5_gn_7_110780 1.0kb downstream 1.0kb downstream 19314   true Lsat_1_v8_lg_7: 185288835-185308148 Lactuca sativa
Lsat_1_v5_gn_7_110780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 185288835-185289834 Lactuca sativa
Lsat_1_v5_gn_7_110780 2.0kb upstream 2.0kb upstream 20314   true Lsat_1_v8_lg_7: 185289835-185310148 Lactuca sativa
Lsat_1_v5_gn_7_110780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 185308149-185310148 Lactuca sativa
Lsat_1_v5_gn_7_110780 2.0kb downstream 2.0kb downstream 20314   true Lsat_1_v8_lg_7: 185287835-185308148 Lactuca sativa
Lsat_1_v5_gn_7_110780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 185287835-185289834 Lactuca sativa
Lsat_1_v5_gn_7_110780 5.0kb upstream 5.0kb upstream 23314   true Lsat_1_v8_lg_7: 185289835-185313148 Lactuca sativa
Lsat_1_v5_gn_7_110780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 185308149-185313148 Lactuca sativa
Lsat_1_v5_gn_7_110780 5.0kb downstream 5.0kb downstream 23314   true Lsat_1_v8_lg_7: 185284835-185308148 Lactuca sativa
Lsat_1_v5_gn_7_110780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 185284835-185289834 Lactuca sativa
Lsat_1_v5_gn_7_110780 10.0kb upstream 10.0kb upstream 28314   true Lsat_1_v8_lg_7: 185289835-185318148 Lactuca sativa
Lsat_1_v5_gn_7_110780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 185308149-185318148 Lactuca sativa
Lsat_1_v5_gn_7_110780 10.0kb downstream 10.0kb downstream 28314   true Lsat_1_v8_lg_7: 185279835-185308148 Lactuca sativa
Lsat_1_v5_gn_7_110780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 185279835-185289834 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468914 5263 Asterids View MSA
123738168 5271 Pentapetalae View MSA
122792653 5272 Eudicot View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain