Gene : Lsat_1_v5_gn_7_110701 L. sativa V8

Defline:  (1 of 1) PTHR11406//PTHR11406:SF9 - PHOSPHOGLYCERATE KINASE // PHOSPHOGLYCERATE KINASE Genomic Order:  3312
Name:  ? Lsat_1_v5_gn_7_110701 Secondary Identifier:  ? PAC:38912085

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa CALVIN-PWY Lactuca sativa pathologic  
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa SUCSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_110701 0.5kb upstream 0.5kb upstream 2956   true Lsat_1_v8_lg_7: 185377874-185380829 Lactuca sativa
Lsat_1_v5_gn_7_110701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 185377874-185378373 Lactuca sativa
Lsat_1_v5_gn_7_110701 0.5kb downstream 0.5kb downstream 2956   true Lsat_1_v8_lg_7: 185378374-185381329 Lactuca sativa
Lsat_1_v5_gn_7_110701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 185380830-185381329 Lactuca sativa
Lsat_1_v5_gn_7_110701 1.0kb upstream 1.0kb upstream 3456   true Lsat_1_v8_lg_7: 185377374-185380829 Lactuca sativa
Lsat_1_v5_gn_7_110701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 185377374-185378373 Lactuca sativa
Lsat_1_v5_gn_7_110701 1.0kb downstream 1.0kb downstream 3456   true Lsat_1_v8_lg_7: 185378374-185381829 Lactuca sativa
Lsat_1_v5_gn_7_110701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 185380830-185381829 Lactuca sativa
Lsat_1_v5_gn_7_110701 2.0kb upstream 2.0kb upstream 4456   true Lsat_1_v8_lg_7: 185376374-185380829 Lactuca sativa
Lsat_1_v5_gn_7_110701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 185376374-185378373 Lactuca sativa
Lsat_1_v5_gn_7_110701 2.0kb downstream 2.0kb downstream 4456   true Lsat_1_v8_lg_7: 185378374-185382829 Lactuca sativa
Lsat_1_v5_gn_7_110701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 185380830-185382829 Lactuca sativa
Lsat_1_v5_gn_7_110701 5.0kb upstream 5.0kb upstream 7456   true Lsat_1_v8_lg_7: 185373374-185380829 Lactuca sativa
Lsat_1_v5_gn_7_110701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 185373374-185378373 Lactuca sativa
Lsat_1_v5_gn_7_110701 5.0kb downstream 5.0kb downstream 7456   true Lsat_1_v8_lg_7: 185378374-185385829 Lactuca sativa
Lsat_1_v5_gn_7_110701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 185380830-185385829 Lactuca sativa
Lsat_1_v5_gn_7_110701 10.0kb upstream 10.0kb upstream 12456   true Lsat_1_v8_lg_7: 185368374-185380829 Lactuca sativa
Lsat_1_v5_gn_7_110701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 185368374-185378373 Lactuca sativa
Lsat_1_v5_gn_7_110701 10.0kb downstream 10.0kb downstream 12456   true Lsat_1_v8_lg_7: 185378374-185390829 Lactuca sativa
Lsat_1_v5_gn_7_110701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 185380830-185390829 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040878 5273 Angiosperm View MSA
121473770 5263 Asterids View MSA
123751254 5271 Pentapetalae View MSA
122790171 5272 Eudicot View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain