Gene : Lsat_1_v5_gn_7_11161 L. sativa V8
Defline:  (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) Genomic Order:  332
Name:  ? Lsat_1_v5_gn_7_11161 Secondary Identifier:  ? PAC:38912195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_11161 0.5kb upstream 0.5kb upstream 4719   true Lsat_1_v8_lg_7: 12806315-12811033 Lactuca sativa
Lsat_1_v5_gn_7_11161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 12810534-12811033 Lactuca sativa
Lsat_1_v5_gn_7_11161 0.5kb downstream 0.5kb downstream 4719   true Lsat_1_v8_lg_7: 12805815-12810533 Lactuca sativa
Lsat_1_v5_gn_7_11161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 12805815-12806314 Lactuca sativa
Lsat_1_v5_gn_7_11161 1.0kb upstream 1.0kb upstream 5219   true Lsat_1_v8_lg_7: 12806315-12811533 Lactuca sativa
Lsat_1_v5_gn_7_11161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 12810534-12811533 Lactuca sativa
Lsat_1_v5_gn_7_11161 1.0kb downstream 1.0kb downstream 5219   true Lsat_1_v8_lg_7: 12805315-12810533 Lactuca sativa
Lsat_1_v5_gn_7_11161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 12805315-12806314 Lactuca sativa
Lsat_1_v5_gn_7_11161 2.0kb upstream 2.0kb upstream 6219   true Lsat_1_v8_lg_7: 12806315-12812533 Lactuca sativa
Lsat_1_v5_gn_7_11161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 12810534-12812533 Lactuca sativa
Lsat_1_v5_gn_7_11161 2.0kb downstream 2.0kb downstream 6219   true Lsat_1_v8_lg_7: 12804315-12810533 Lactuca sativa
Lsat_1_v5_gn_7_11161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 12804315-12806314 Lactuca sativa
Lsat_1_v5_gn_7_11161 5.0kb upstream 5.0kb upstream 9219   true Lsat_1_v8_lg_7: 12806315-12815533 Lactuca sativa
Lsat_1_v5_gn_7_11161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 12810534-12815533 Lactuca sativa
Lsat_1_v5_gn_7_11161 5.0kb downstream 5.0kb downstream 9219   true Lsat_1_v8_lg_7: 12801315-12810533 Lactuca sativa
Lsat_1_v5_gn_7_11161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 12801315-12806314 Lactuca sativa
Lsat_1_v5_gn_7_11161 10.0kb upstream 10.0kb upstream 14219   true Lsat_1_v8_lg_7: 12806315-12820533 Lactuca sativa
Lsat_1_v5_gn_7_11161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 12810534-12820533 Lactuca sativa
Lsat_1_v5_gn_7_11161 10.0kb downstream 10.0kb downstream 14219   true Lsat_1_v8_lg_7: 12796315-12810533 Lactuca sativa
Lsat_1_v5_gn_7_11161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 12796315-12806314 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477671 5263 Asterids View MSA
123740016 5271 Pentapetalae View MSA
122794564 5272 Eudicot View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain