Gene : Lsat_1_v5_gn_7_1120 L. sativa V8
Defline:  (1 of 15) PF06974 - Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  34
Name:  ? Lsat_1_v5_gn_7_1120 Secondary Identifier:  ? PAC:38909702
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_1120 0.5kb upstream 0.5kb upstream 1057   true Lsat_1_v8_lg_7: 2285693-2286749 Lactuca sativa
Lsat_1_v5_gn_7_1120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 2285693-2286192 Lactuca sativa
Lsat_1_v5_gn_7_1120 0.5kb downstream 0.5kb downstream 1057   true Lsat_1_v8_lg_7: 2286193-2287249 Lactuca sativa
Lsat_1_v5_gn_7_1120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 2286750-2287249 Lactuca sativa
Lsat_1_v5_gn_7_1120 1.0kb upstream 1.0kb upstream 1557   true Lsat_1_v8_lg_7: 2285193-2286749 Lactuca sativa
Lsat_1_v5_gn_7_1120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 2285193-2286192 Lactuca sativa
Lsat_1_v5_gn_7_1120 1.0kb downstream 1.0kb downstream 1557   true Lsat_1_v8_lg_7: 2286193-2287749 Lactuca sativa
Lsat_1_v5_gn_7_1120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 2286750-2287749 Lactuca sativa
Lsat_1_v5_gn_7_1120 2.0kb upstream 2.0kb upstream 2557   true Lsat_1_v8_lg_7: 2284193-2286749 Lactuca sativa
Lsat_1_v5_gn_7_1120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 2284193-2286192 Lactuca sativa
Lsat_1_v5_gn_7_1120 2.0kb downstream 2.0kb downstream 2557   true Lsat_1_v8_lg_7: 2286193-2288749 Lactuca sativa
Lsat_1_v5_gn_7_1120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 2286750-2288749 Lactuca sativa
Lsat_1_v5_gn_7_1120 5.0kb upstream 5.0kb upstream 5557   true Lsat_1_v8_lg_7: 2281193-2286749 Lactuca sativa
Lsat_1_v5_gn_7_1120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 2281193-2286192 Lactuca sativa
Lsat_1_v5_gn_7_1120 5.0kb downstream 5.0kb downstream 5557   true Lsat_1_v8_lg_7: 2286193-2291749 Lactuca sativa
Lsat_1_v5_gn_7_1120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 2286750-2291749 Lactuca sativa
Lsat_1_v5_gn_7_1120 10.0kb upstream 10.0kb upstream 10557   true Lsat_1_v8_lg_7: 2276193-2286749 Lactuca sativa
Lsat_1_v5_gn_7_1120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 2276193-2286192 Lactuca sativa
Lsat_1_v5_gn_7_1120 10.0kb downstream 10.0kb downstream 10557   true Lsat_1_v8_lg_7: 2286193-2296749 Lactuca sativa
Lsat_1_v5_gn_7_1120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 2286750-2296749 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478697 5263 Asterids View MSA
123753157 5271 Pentapetalae View MSA
122794837 5272 Eudicot View MSA
122049272 5273 Angiosperm View MSA
121311322 5274 Embryophyte View MSA
123348632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain