Gene : Lsat_1_v5_gn_7_116201 L. sativa V8
Defline:  (1 of 2) PTHR11208//PTHR11208:SF48 - RNA-BINDING PROTEIN RELATED // SUBFAMILY NOT NAMED Genomic Order:  3396
Name:  ? Lsat_1_v5_gn_7_116201 Secondary Identifier:  ? PAC:38910540
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_116201 0.5kb upstream 0.5kb upstream 3801   true Lsat_1_v8_lg_7: 191352808-191356608 Lactuca sativa
Lsat_1_v5_gn_7_116201 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 191356109-191356608 Lactuca sativa
Lsat_1_v5_gn_7_116201 0.5kb downstream 0.5kb downstream 3801   true Lsat_1_v8_lg_7: 191352308-191356108 Lactuca sativa
Lsat_1_v5_gn_7_116201 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 191352308-191352807 Lactuca sativa
Lsat_1_v5_gn_7_116201 1.0kb upstream 1.0kb upstream 4301   true Lsat_1_v8_lg_7: 191352808-191357108 Lactuca sativa
Lsat_1_v5_gn_7_116201 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 191356109-191357108 Lactuca sativa
Lsat_1_v5_gn_7_116201 1.0kb downstream 1.0kb downstream 4301   true Lsat_1_v8_lg_7: 191351808-191356108 Lactuca sativa
Lsat_1_v5_gn_7_116201 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 191351808-191352807 Lactuca sativa
Lsat_1_v5_gn_7_116201 2.0kb upstream 2.0kb upstream 5301   true Lsat_1_v8_lg_7: 191352808-191358108 Lactuca sativa
Lsat_1_v5_gn_7_116201 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 191356109-191358108 Lactuca sativa
Lsat_1_v5_gn_7_116201 2.0kb downstream 2.0kb downstream 5301   true Lsat_1_v8_lg_7: 191350808-191356108 Lactuca sativa
Lsat_1_v5_gn_7_116201 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 191350808-191352807 Lactuca sativa
Lsat_1_v5_gn_7_116201 5.0kb upstream 5.0kb upstream 8301   true Lsat_1_v8_lg_7: 191352808-191361108 Lactuca sativa
Lsat_1_v5_gn_7_116201 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 191356109-191361108 Lactuca sativa
Lsat_1_v5_gn_7_116201 5.0kb downstream 5.0kb downstream 8301   true Lsat_1_v8_lg_7: 191347808-191356108 Lactuca sativa
Lsat_1_v5_gn_7_116201 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 191347808-191352807 Lactuca sativa
Lsat_1_v5_gn_7_116201 10.0kb upstream 10.0kb upstream 13301   true Lsat_1_v8_lg_7: 191352808-191366108 Lactuca sativa
Lsat_1_v5_gn_7_116201 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 191356109-191366108 Lactuca sativa
Lsat_1_v5_gn_7_116201 10.0kb downstream 10.0kb downstream 13301   true Lsat_1_v8_lg_7: 191342808-191356108 Lactuca sativa
Lsat_1_v5_gn_7_116201 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 191342808-191352807 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470696 5263 Asterids View MSA
123738664 5271 Pentapetalae View MSA
122792934 5272 Eudicot View MSA
122044537 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain