Gene : Lsat_1_v5_gn_7_116180 L. sativa V8
Defline:  (1 of 4) PF13202//PF13499//PF13833 - EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_7) // EF-hand domain pair (EF-hand_8) Genomic Order:  3395
Name:  ? Lsat_1_v5_gn_7_116180 Secondary Identifier:  ? PAC:38911366
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_116180 0.5kb upstream 0.5kb upstream 5723   true Lsat_1_v8_lg_7: 191348147-191353869 Lactuca sativa
Lsat_1_v5_gn_7_116180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 191348147-191348646 Lactuca sativa
Lsat_1_v5_gn_7_116180 0.5kb downstream 0.5kb downstream 5723   true Lsat_1_v8_lg_7: 191348647-191354369 Lactuca sativa
Lsat_1_v5_gn_7_116180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 191353870-191354369 Lactuca sativa
Lsat_1_v5_gn_7_116180 1.0kb upstream 1.0kb upstream 6223   true Lsat_1_v8_lg_7: 191347647-191353869 Lactuca sativa
Lsat_1_v5_gn_7_116180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 191347647-191348646 Lactuca sativa
Lsat_1_v5_gn_7_116180 1.0kb downstream 1.0kb downstream 6223   true Lsat_1_v8_lg_7: 191348647-191354869 Lactuca sativa
Lsat_1_v5_gn_7_116180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 191353870-191354869 Lactuca sativa
Lsat_1_v5_gn_7_116180 2.0kb upstream 2.0kb upstream 7223   true Lsat_1_v8_lg_7: 191346647-191353869 Lactuca sativa
Lsat_1_v5_gn_7_116180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 191346647-191348646 Lactuca sativa
Lsat_1_v5_gn_7_116180 2.0kb downstream 2.0kb downstream 7223   true Lsat_1_v8_lg_7: 191348647-191355869 Lactuca sativa
Lsat_1_v5_gn_7_116180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 191353870-191355869 Lactuca sativa
Lsat_1_v5_gn_7_116180 5.0kb upstream 5.0kb upstream 10223   true Lsat_1_v8_lg_7: 191343647-191353869 Lactuca sativa
Lsat_1_v5_gn_7_116180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 191343647-191348646 Lactuca sativa
Lsat_1_v5_gn_7_116180 5.0kb downstream 5.0kb downstream 10223   true Lsat_1_v8_lg_7: 191348647-191358869 Lactuca sativa
Lsat_1_v5_gn_7_116180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 191353870-191358869 Lactuca sativa
Lsat_1_v5_gn_7_116180 10.0kb upstream 10.0kb upstream 15223   true Lsat_1_v8_lg_7: 191338647-191353869 Lactuca sativa
Lsat_1_v5_gn_7_116180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 191338647-191348646 Lactuca sativa
Lsat_1_v5_gn_7_116180 10.0kb downstream 10.0kb downstream 15223   true Lsat_1_v8_lg_7: 191348647-191363869 Lactuca sativa
Lsat_1_v5_gn_7_116180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 191353870-191363869 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041090 5273 Angiosperm View MSA
121476989 5263 Asterids View MSA
123746519 5271 Pentapetalae View MSA
122793448 5272 Eudicot View MSA
121346825 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain