Gene : Lsat_1_v5_gn_7_13561 L. sativa V8
Defline:  (1 of 1) K03138 - transcription initiation factor TFIIF subunit alpha (TFIIF1, GTF2F1, TFG1) Genomic Order:  452
Name:  ? Lsat_1_v5_gn_7_13561 Secondary Identifier:  ? PAC:38910829
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_13561 0.5kb upstream 0.5kb upstream 8718   true Lsat_1_v8_lg_7: 17238550-17247267 Lactuca sativa
Lsat_1_v5_gn_7_13561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 17238550-17239049 Lactuca sativa
Lsat_1_v5_gn_7_13561 0.5kb downstream 0.5kb downstream 8718   true Lsat_1_v8_lg_7: 17239050-17247767 Lactuca sativa
Lsat_1_v5_gn_7_13561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 17247268-17247767 Lactuca sativa
Lsat_1_v5_gn_7_13561 1.0kb upstream 1.0kb upstream 9218   true Lsat_1_v8_lg_7: 17238050-17247267 Lactuca sativa
Lsat_1_v5_gn_7_13561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 17238050-17239049 Lactuca sativa
Lsat_1_v5_gn_7_13561 1.0kb downstream 1.0kb downstream 9218   true Lsat_1_v8_lg_7: 17239050-17248267 Lactuca sativa
Lsat_1_v5_gn_7_13561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 17247268-17248267 Lactuca sativa
Lsat_1_v5_gn_7_13561 2.0kb upstream 2.0kb upstream 10218   true Lsat_1_v8_lg_7: 17237050-17247267 Lactuca sativa
Lsat_1_v5_gn_7_13561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 17237050-17239049 Lactuca sativa
Lsat_1_v5_gn_7_13561 2.0kb downstream 2.0kb downstream 10218   true Lsat_1_v8_lg_7: 17239050-17249267 Lactuca sativa
Lsat_1_v5_gn_7_13561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 17247268-17249267 Lactuca sativa
Lsat_1_v5_gn_7_13561 5.0kb upstream 5.0kb upstream 13218   true Lsat_1_v8_lg_7: 17234050-17247267 Lactuca sativa
Lsat_1_v5_gn_7_13561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 17234050-17239049 Lactuca sativa
Lsat_1_v5_gn_7_13561 5.0kb downstream 5.0kb downstream 13218   true Lsat_1_v8_lg_7: 17239050-17252267 Lactuca sativa
Lsat_1_v5_gn_7_13561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 17247268-17252267 Lactuca sativa
Lsat_1_v5_gn_7_13561 10.0kb upstream 10.0kb upstream 18218   true Lsat_1_v8_lg_7: 17229050-17247267 Lactuca sativa
Lsat_1_v5_gn_7_13561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 17229050-17239049 Lactuca sativa
Lsat_1_v5_gn_7_13561 10.0kb downstream 10.0kb downstream 18218   true Lsat_1_v8_lg_7: 17239050-17257267 Lactuca sativa
Lsat_1_v5_gn_7_13561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 17247268-17257267 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474823 5263 Asterids View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain