Gene : Lsat_1_v5_gn_7_12961 L. sativa V8
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  419
Name:  ? Lsat_1_v5_gn_7_12961 Secondary Identifier:  ? PAC:38913918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_12961 0.5kb upstream 0.5kb upstream 2118   true Lsat_1_v8_lg_7: 15868657-15870774 Lactuca sativa
Lsat_1_v5_gn_7_12961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 15870275-15870774 Lactuca sativa
Lsat_1_v5_gn_7_12961 0.5kb downstream 0.5kb downstream 2118   true Lsat_1_v8_lg_7: 15868157-15870274 Lactuca sativa
Lsat_1_v5_gn_7_12961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 15868157-15868656 Lactuca sativa
Lsat_1_v5_gn_7_12961 1.0kb upstream 1.0kb upstream 2618   true Lsat_1_v8_lg_7: 15868657-15871274 Lactuca sativa
Lsat_1_v5_gn_7_12961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 15870275-15871274 Lactuca sativa
Lsat_1_v5_gn_7_12961 1.0kb downstream 1.0kb downstream 2618   true Lsat_1_v8_lg_7: 15867657-15870274 Lactuca sativa
Lsat_1_v5_gn_7_12961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 15867657-15868656 Lactuca sativa
Lsat_1_v5_gn_7_12961 2.0kb upstream 2.0kb upstream 3618   true Lsat_1_v8_lg_7: 15868657-15872274 Lactuca sativa
Lsat_1_v5_gn_7_12961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 15870275-15872274 Lactuca sativa
Lsat_1_v5_gn_7_12961 2.0kb downstream 2.0kb downstream 3618   true Lsat_1_v8_lg_7: 15866657-15870274 Lactuca sativa
Lsat_1_v5_gn_7_12961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 15866657-15868656 Lactuca sativa
Lsat_1_v5_gn_7_12961 5.0kb upstream 5.0kb upstream 6618   true Lsat_1_v8_lg_7: 15868657-15875274 Lactuca sativa
Lsat_1_v5_gn_7_12961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 15870275-15875274 Lactuca sativa
Lsat_1_v5_gn_7_12961 5.0kb downstream 5.0kb downstream 6618   true Lsat_1_v8_lg_7: 15863657-15870274 Lactuca sativa
Lsat_1_v5_gn_7_12961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 15863657-15868656 Lactuca sativa
Lsat_1_v5_gn_7_12961 10.0kb upstream 10.0kb upstream 11618   true Lsat_1_v8_lg_7: 15868657-15880274 Lactuca sativa
Lsat_1_v5_gn_7_12961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 15870275-15880274 Lactuca sativa
Lsat_1_v5_gn_7_12961 10.0kb downstream 10.0kb downstream 11618   true Lsat_1_v8_lg_7: 15858657-15870274 Lactuca sativa
Lsat_1_v5_gn_7_12961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 15858657-15868656 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476313 5263 Asterids View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain