Gene : Lsat_1_v5_gn_7_51181 L. sativa V8
Defline:  (1 of 2) K18798 - protein AFG1 (AFG1, LACE1) Genomic Order:  1630
Name:  ? Lsat_1_v5_gn_7_51181 Secondary Identifier:  ? PAC:38910256
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa GLUCOSE1PMETAB-PWY Lactuca sativa pathologic  
Lsativa PWY-621 Lactuca sativa pathologic  
Lsativa PWY-7238 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_51181 0.5kb upstream 0.5kb upstream 5278   true Lsat_1_v8_lg_7: 71021573-71026850 Lactuca sativa
Lsat_1_v5_gn_7_51181 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 71021573-71022072 Lactuca sativa
Lsat_1_v5_gn_7_51181 0.5kb downstream 0.5kb downstream 5278   true Lsat_1_v8_lg_7: 71022073-71027350 Lactuca sativa
Lsat_1_v5_gn_7_51181 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 71026851-71027350 Lactuca sativa
Lsat_1_v5_gn_7_51181 1.0kb upstream 1.0kb upstream 5778   true Lsat_1_v8_lg_7: 71021073-71026850 Lactuca sativa
Lsat_1_v5_gn_7_51181 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 71021073-71022072 Lactuca sativa
Lsat_1_v5_gn_7_51181 1.0kb downstream 1.0kb downstream 5778   true Lsat_1_v8_lg_7: 71022073-71027850 Lactuca sativa
Lsat_1_v5_gn_7_51181 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 71026851-71027850 Lactuca sativa
Lsat_1_v5_gn_7_51181 2.0kb upstream 2.0kb upstream 6778   true Lsat_1_v8_lg_7: 71020073-71026850 Lactuca sativa
Lsat_1_v5_gn_7_51181 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 71020073-71022072 Lactuca sativa
Lsat_1_v5_gn_7_51181 2.0kb downstream 2.0kb downstream 6778   true Lsat_1_v8_lg_7: 71022073-71028850 Lactuca sativa
Lsat_1_v5_gn_7_51181 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 71026851-71028850 Lactuca sativa
Lsat_1_v5_gn_7_51181 5.0kb upstream 5.0kb upstream 9778   true Lsat_1_v8_lg_7: 71017073-71026850 Lactuca sativa
Lsat_1_v5_gn_7_51181 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 71017073-71022072 Lactuca sativa
Lsat_1_v5_gn_7_51181 5.0kb downstream 5.0kb downstream 9778   true Lsat_1_v8_lg_7: 71022073-71031850 Lactuca sativa
Lsat_1_v5_gn_7_51181 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 71026851-71031850 Lactuca sativa
Lsat_1_v5_gn_7_51181 10.0kb upstream 10.0kb upstream 14778   true Lsat_1_v8_lg_7: 71012073-71026850 Lactuca sativa
Lsat_1_v5_gn_7_51181 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 71012073-71022072 Lactuca sativa
Lsat_1_v5_gn_7_51181 10.0kb downstream 10.0kb downstream 14778   true Lsat_1_v8_lg_7: 71022073-71036850 Lactuca sativa
Lsat_1_v5_gn_7_51181 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 71026851-71036850 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470841 5263 Asterids View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain