Gene : Lsat_1_v5_gn_7_52420 L. sativa V8
Defline:  (1 of 5) PTHR22595//PTHR22595:SF33 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1660
Name:  ? Lsat_1_v5_gn_7_52420 Secondary Identifier:  ? PAC:38914754
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_52420 0.5kb upstream 0.5kb upstream 1058   true Lsat_1_v8_lg_7: 72276250-72277307 Lactuca sativa
Lsat_1_v5_gn_7_52420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 72276250-72276749 Lactuca sativa
Lsat_1_v5_gn_7_52420 0.5kb downstream 0.5kb downstream 1058   true Lsat_1_v8_lg_7: 72276750-72277807 Lactuca sativa
Lsat_1_v5_gn_7_52420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 72277308-72277807 Lactuca sativa
Lsat_1_v5_gn_7_52420 1.0kb upstream 1.0kb upstream 1558   true Lsat_1_v8_lg_7: 72275750-72277307 Lactuca sativa
Lsat_1_v5_gn_7_52420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 72275750-72276749 Lactuca sativa
Lsat_1_v5_gn_7_52420 1.0kb downstream 1.0kb downstream 1558   true Lsat_1_v8_lg_7: 72276750-72278307 Lactuca sativa
Lsat_1_v5_gn_7_52420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 72277308-72278307 Lactuca sativa
Lsat_1_v5_gn_7_52420 2.0kb upstream 2.0kb upstream 2558   true Lsat_1_v8_lg_7: 72274750-72277307 Lactuca sativa
Lsat_1_v5_gn_7_52420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 72274750-72276749 Lactuca sativa
Lsat_1_v5_gn_7_52420 2.0kb downstream 2.0kb downstream 2558   true Lsat_1_v8_lg_7: 72276750-72279307 Lactuca sativa
Lsat_1_v5_gn_7_52420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 72277308-72279307 Lactuca sativa
Lsat_1_v5_gn_7_52420 5.0kb upstream 5.0kb upstream 5558   true Lsat_1_v8_lg_7: 72271750-72277307 Lactuca sativa
Lsat_1_v5_gn_7_52420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 72271750-72276749 Lactuca sativa
Lsat_1_v5_gn_7_52420 5.0kb downstream 5.0kb downstream 5558   true Lsat_1_v8_lg_7: 72276750-72282307 Lactuca sativa
Lsat_1_v5_gn_7_52420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 72277308-72282307 Lactuca sativa
Lsat_1_v5_gn_7_52420 10.0kb upstream 10.0kb upstream 10558   true Lsat_1_v8_lg_7: 72266750-72277307 Lactuca sativa
Lsat_1_v5_gn_7_52420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 72266750-72276749 Lactuca sativa
Lsat_1_v5_gn_7_52420 10.0kb downstream 10.0kb downstream 10558   true Lsat_1_v8_lg_7: 72276750-72287307 Lactuca sativa
Lsat_1_v5_gn_7_52420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 72277308-72287307 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480870 5263 Asterids View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain