Gene : Lsat_1_v5_gn_7_52320 L. sativa V8
Defline:  (1 of 5) PTHR22595//PTHR22595:SF33 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1655
Name:  ? Lsat_1_v5_gn_7_52320 Secondary Identifier:  ? PAC:38913261
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_52320 0.5kb upstream 0.5kb upstream 1400   true Lsat_1_v8_lg_7: 72110384-72111783 Lactuca sativa
Lsat_1_v5_gn_7_52320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 72110384-72110883 Lactuca sativa
Lsat_1_v5_gn_7_52320 0.5kb downstream 0.5kb downstream 1400   true Lsat_1_v8_lg_7: 72110884-72112283 Lactuca sativa
Lsat_1_v5_gn_7_52320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 72111784-72112283 Lactuca sativa
Lsat_1_v5_gn_7_52320 1.0kb upstream 1.0kb upstream 1900   true Lsat_1_v8_lg_7: 72109884-72111783 Lactuca sativa
Lsat_1_v5_gn_7_52320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 72109884-72110883 Lactuca sativa
Lsat_1_v5_gn_7_52320 1.0kb downstream 1.0kb downstream 1900   true Lsat_1_v8_lg_7: 72110884-72112783 Lactuca sativa
Lsat_1_v5_gn_7_52320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 72111784-72112783 Lactuca sativa
Lsat_1_v5_gn_7_52320 2.0kb upstream 2.0kb upstream 2900   true Lsat_1_v8_lg_7: 72108884-72111783 Lactuca sativa
Lsat_1_v5_gn_7_52320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 72108884-72110883 Lactuca sativa
Lsat_1_v5_gn_7_52320 2.0kb downstream 2.0kb downstream 2900   true Lsat_1_v8_lg_7: 72110884-72113783 Lactuca sativa
Lsat_1_v5_gn_7_52320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 72111784-72113783 Lactuca sativa
Lsat_1_v5_gn_7_52320 5.0kb upstream 5.0kb upstream 5900   true Lsat_1_v8_lg_7: 72105884-72111783 Lactuca sativa
Lsat_1_v5_gn_7_52320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 72105884-72110883 Lactuca sativa
Lsat_1_v5_gn_7_52320 5.0kb downstream 5.0kb downstream 5900   true Lsat_1_v8_lg_7: 72110884-72116783 Lactuca sativa
Lsat_1_v5_gn_7_52320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 72111784-72116783 Lactuca sativa
Lsat_1_v5_gn_7_52320 10.0kb upstream 10.0kb upstream 10900   true Lsat_1_v8_lg_7: 72100884-72111783 Lactuca sativa
Lsat_1_v5_gn_7_52320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 72100884-72110883 Lactuca sativa
Lsat_1_v5_gn_7_52320 10.0kb downstream 10.0kb downstream 10900   true Lsat_1_v8_lg_7: 72110884-72121783 Lactuca sativa
Lsat_1_v5_gn_7_52320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 72111784-72121783 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476739 5263 Asterids View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain