Gene : Lsat_1_v5_gn_7_51941 L. sativa V8
Defline:  (1 of 1) K05286 - phosphatidylinositol glycan, class B (PIGB) Genomic Order:  1644
Name:  ? Lsat_1_v5_gn_7_51941 Secondary Identifier:  ? PAC:38914533
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_51941 0.5kb upstream 0.5kb upstream 4999   true Lsat_1_v8_lg_7: 71803961-71808959 Lactuca sativa
Lsat_1_v5_gn_7_51941 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 71808460-71808959 Lactuca sativa
Lsat_1_v5_gn_7_51941 0.5kb downstream 0.5kb downstream 4999   true Lsat_1_v8_lg_7: 71803461-71808459 Lactuca sativa
Lsat_1_v5_gn_7_51941 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 71803461-71803960 Lactuca sativa
Lsat_1_v5_gn_7_51941 1.0kb upstream 1.0kb upstream 5499   true Lsat_1_v8_lg_7: 71803961-71809459 Lactuca sativa
Lsat_1_v5_gn_7_51941 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 71808460-71809459 Lactuca sativa
Lsat_1_v5_gn_7_51941 1.0kb downstream 1.0kb downstream 5499   true Lsat_1_v8_lg_7: 71802961-71808459 Lactuca sativa
Lsat_1_v5_gn_7_51941 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 71802961-71803960 Lactuca sativa
Lsat_1_v5_gn_7_51941 2.0kb upstream 2.0kb upstream 6499   true Lsat_1_v8_lg_7: 71803961-71810459 Lactuca sativa
Lsat_1_v5_gn_7_51941 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 71808460-71810459 Lactuca sativa
Lsat_1_v5_gn_7_51941 2.0kb downstream 2.0kb downstream 6499   true Lsat_1_v8_lg_7: 71801961-71808459 Lactuca sativa
Lsat_1_v5_gn_7_51941 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 71801961-71803960 Lactuca sativa
Lsat_1_v5_gn_7_51941 5.0kb upstream 5.0kb upstream 9499   true Lsat_1_v8_lg_7: 71803961-71813459 Lactuca sativa
Lsat_1_v5_gn_7_51941 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 71808460-71813459 Lactuca sativa
Lsat_1_v5_gn_7_51941 5.0kb downstream 5.0kb downstream 9499   true Lsat_1_v8_lg_7: 71798961-71808459 Lactuca sativa
Lsat_1_v5_gn_7_51941 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 71798961-71803960 Lactuca sativa
Lsat_1_v5_gn_7_51941 10.0kb upstream 10.0kb upstream 14499   true Lsat_1_v8_lg_7: 71803961-71818459 Lactuca sativa
Lsat_1_v5_gn_7_51941 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 71808460-71818459 Lactuca sativa
Lsat_1_v5_gn_7_51941 10.0kb downstream 10.0kb downstream 14499   true Lsat_1_v8_lg_7: 71793961-71808459 Lactuca sativa
Lsat_1_v5_gn_7_51941 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 71793961-71803960 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466487 5263 Asterids View MSA
123737341 5271 Pentapetalae View MSA
122796897 5272 Eudicot View MSA
122042871 5273 Angiosperm View MSA
121346274 5274 Embryophyte View MSA
123425289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain