Gene : Lsat_1_v5_gn_7_53500 L. sativa V8
Defline:  (1 of 6) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) Genomic Order:  1743
Name:  ? Lsat_1_v5_gn_7_53500 Secondary Identifier:  ? PAC:38913037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_53500 0.5kb upstream 0.5kb upstream 4053   true Lsat_1_v8_lg_7: 77283721-77287773 Lactuca sativa
Lsat_1_v5_gn_7_53500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 77283721-77284220 Lactuca sativa
Lsat_1_v5_gn_7_53500 0.5kb downstream 0.5kb downstream 4053   true Lsat_1_v8_lg_7: 77284221-77288273 Lactuca sativa
Lsat_1_v5_gn_7_53500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 77287774-77288273 Lactuca sativa
Lsat_1_v5_gn_7_53500 1.0kb upstream 1.0kb upstream 4553   true Lsat_1_v8_lg_7: 77283221-77287773 Lactuca sativa
Lsat_1_v5_gn_7_53500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 77283221-77284220 Lactuca sativa
Lsat_1_v5_gn_7_53500 1.0kb downstream 1.0kb downstream 4553   true Lsat_1_v8_lg_7: 77284221-77288773 Lactuca sativa
Lsat_1_v5_gn_7_53500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 77287774-77288773 Lactuca sativa
Lsat_1_v5_gn_7_53500 2.0kb upstream 2.0kb upstream 5553   true Lsat_1_v8_lg_7: 77282221-77287773 Lactuca sativa
Lsat_1_v5_gn_7_53500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 77282221-77284220 Lactuca sativa
Lsat_1_v5_gn_7_53500 2.0kb downstream 2.0kb downstream 5553   true Lsat_1_v8_lg_7: 77284221-77289773 Lactuca sativa
Lsat_1_v5_gn_7_53500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 77287774-77289773 Lactuca sativa
Lsat_1_v5_gn_7_53500 5.0kb upstream 5.0kb upstream 8553   true Lsat_1_v8_lg_7: 77279221-77287773 Lactuca sativa
Lsat_1_v5_gn_7_53500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 77279221-77284220 Lactuca sativa
Lsat_1_v5_gn_7_53500 5.0kb downstream 5.0kb downstream 8553   true Lsat_1_v8_lg_7: 77284221-77292773 Lactuca sativa
Lsat_1_v5_gn_7_53500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 77287774-77292773 Lactuca sativa
Lsat_1_v5_gn_7_53500 10.0kb upstream 10.0kb upstream 13553   true Lsat_1_v8_lg_7: 77274221-77287773 Lactuca sativa
Lsat_1_v5_gn_7_53500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 77274221-77284220 Lactuca sativa
Lsat_1_v5_gn_7_53500 10.0kb downstream 10.0kb downstream 13553   true Lsat_1_v8_lg_7: 77284221-77297773 Lactuca sativa
Lsat_1_v5_gn_7_53500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 77287774-77297773 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471124 5263 Asterids View MSA
123738887 5271 Pentapetalae View MSA
122785902 5272 Eudicot View MSA
122051295 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121349652 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain