Gene : Lsat_1_v5_gn_7_53320 L. sativa V8
Defline:  (1 of 2) PTHR11638//PTHR11638:SF94 - ATP-DEPENDENT CLP PROTEASE // HEAT SHOCK PROTEIN 104 Genomic Order:  1682
Name:  ? Lsat_1_v5_gn_7_53320 Secondary Identifier:  ? PAC:38912192
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_53320 0.5kb upstream 0.5kb upstream 4811   true Lsat_1_v8_lg_7: 73099560-73104370 Lactuca sativa
Lsat_1_v5_gn_7_53320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 73103871-73104370 Lactuca sativa
Lsat_1_v5_gn_7_53320 0.5kb downstream 0.5kb downstream 4811   true Lsat_1_v8_lg_7: 73099060-73103870 Lactuca sativa
Lsat_1_v5_gn_7_53320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 73099060-73099559 Lactuca sativa
Lsat_1_v5_gn_7_53320 1.0kb upstream 1.0kb upstream 5311   true Lsat_1_v8_lg_7: 73099560-73104870 Lactuca sativa
Lsat_1_v5_gn_7_53320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 73103871-73104870 Lactuca sativa
Lsat_1_v5_gn_7_53320 1.0kb downstream 1.0kb downstream 5311   true Lsat_1_v8_lg_7: 73098560-73103870 Lactuca sativa
Lsat_1_v5_gn_7_53320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 73098560-73099559 Lactuca sativa
Lsat_1_v5_gn_7_53320 2.0kb upstream 2.0kb upstream 6311   true Lsat_1_v8_lg_7: 73099560-73105870 Lactuca sativa
Lsat_1_v5_gn_7_53320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 73103871-73105870 Lactuca sativa
Lsat_1_v5_gn_7_53320 2.0kb downstream 2.0kb downstream 6311   true Lsat_1_v8_lg_7: 73097560-73103870 Lactuca sativa
Lsat_1_v5_gn_7_53320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 73097560-73099559 Lactuca sativa
Lsat_1_v5_gn_7_53320 5.0kb upstream 5.0kb upstream 9311   true Lsat_1_v8_lg_7: 73099560-73108870 Lactuca sativa
Lsat_1_v5_gn_7_53320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 73103871-73108870 Lactuca sativa
Lsat_1_v5_gn_7_53320 5.0kb downstream 5.0kb downstream 9311   true Lsat_1_v8_lg_7: 73094560-73103870 Lactuca sativa
Lsat_1_v5_gn_7_53320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 73094560-73099559 Lactuca sativa
Lsat_1_v5_gn_7_53320 10.0kb upstream 10.0kb upstream 14311   true Lsat_1_v8_lg_7: 73099560-73113870 Lactuca sativa
Lsat_1_v5_gn_7_53320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 73103871-73113870 Lactuca sativa
Lsat_1_v5_gn_7_53320 10.0kb downstream 10.0kb downstream 14311   true Lsat_1_v8_lg_7: 73089560-73103870 Lactuca sativa
Lsat_1_v5_gn_7_53320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 73089560-73099559 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452438 5263 Asterids View MSA
123749745 5271 Pentapetalae View MSA
122792327 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain