Gene : Lsat_1_v5_gn_7_54021 L. sativa V8
Defline:  (1 of 1) PTHR13096:SF5 - 50S RIBOSOMAL PROTEIN L16 ARGININE HYDROXYLASE Genomic Order:  1751
Name:  ? Lsat_1_v5_gn_7_54021 Secondary Identifier:  ? PAC:38910275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_54021 0.5kb upstream 0.5kb upstream 5843   true Lsat_1_v8_lg_7: 77457782-77463624 Lactuca sativa
Lsat_1_v5_gn_7_54021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 77463125-77463624 Lactuca sativa
Lsat_1_v5_gn_7_54021 0.5kb downstream 0.5kb downstream 5843   true Lsat_1_v8_lg_7: 77457282-77463124 Lactuca sativa
Lsat_1_v5_gn_7_54021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 77457282-77457781 Lactuca sativa
Lsat_1_v5_gn_7_54021 1.0kb upstream 1.0kb upstream 6343   true Lsat_1_v8_lg_7: 77457782-77464124 Lactuca sativa
Lsat_1_v5_gn_7_54021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 77463125-77464124 Lactuca sativa
Lsat_1_v5_gn_7_54021 1.0kb downstream 1.0kb downstream 6343   true Lsat_1_v8_lg_7: 77456782-77463124 Lactuca sativa
Lsat_1_v5_gn_7_54021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 77456782-77457781 Lactuca sativa
Lsat_1_v5_gn_7_54021 2.0kb upstream 2.0kb upstream 7343   true Lsat_1_v8_lg_7: 77457782-77465124 Lactuca sativa
Lsat_1_v5_gn_7_54021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 77463125-77465124 Lactuca sativa
Lsat_1_v5_gn_7_54021 2.0kb downstream 2.0kb downstream 7343   true Lsat_1_v8_lg_7: 77455782-77463124 Lactuca sativa
Lsat_1_v5_gn_7_54021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 77455782-77457781 Lactuca sativa
Lsat_1_v5_gn_7_54021 5.0kb upstream 5.0kb upstream 10343   true Lsat_1_v8_lg_7: 77457782-77468124 Lactuca sativa
Lsat_1_v5_gn_7_54021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 77463125-77468124 Lactuca sativa
Lsat_1_v5_gn_7_54021 5.0kb downstream 5.0kb downstream 10343   true Lsat_1_v8_lg_7: 77452782-77463124 Lactuca sativa
Lsat_1_v5_gn_7_54021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 77452782-77457781 Lactuca sativa
Lsat_1_v5_gn_7_54021 10.0kb upstream 10.0kb upstream 15343   true Lsat_1_v8_lg_7: 77457782-77473124 Lactuca sativa
Lsat_1_v5_gn_7_54021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 77463125-77473124 Lactuca sativa
Lsat_1_v5_gn_7_54021 10.0kb downstream 10.0kb downstream 15343   true Lsat_1_v8_lg_7: 77447782-77463124 Lactuca sativa
Lsat_1_v5_gn_7_54021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 77447782-77457781 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468820 5263 Asterids View MSA
123745508 5271 Pentapetalae View MSA
122794724 5272 Eudicot View MSA
122049109 5273 Angiosperm View MSA
121348798 5274 Embryophyte View MSA
123428618 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain