Gene : Lsat_1_v5_gn_7_54881 L. sativa V8
Defline:  (1 of 2) K01885 - glutamyl-tRNA synthetase (EARS, gltX) Genomic Order:  1737
Name:  ? Lsat_1_v5_gn_7_54881 Secondary Identifier:  ? PAC:38910964
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5188 Lactuca sativa pathologic  
Lsativa PWY-5918 Lactuca sativa pathologic  
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_54881 0.5kb upstream 0.5kb upstream 3696   true Lsat_1_v8_lg_7: 77093589-77097284 Lactuca sativa
Lsat_1_v5_gn_7_54881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 77096785-77097284 Lactuca sativa
Lsat_1_v5_gn_7_54881 0.5kb downstream 0.5kb downstream 3696   true Lsat_1_v8_lg_7: 77093089-77096784 Lactuca sativa
Lsat_1_v5_gn_7_54881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 77093089-77093588 Lactuca sativa
Lsat_1_v5_gn_7_54881 1.0kb upstream 1.0kb upstream 4196   true Lsat_1_v8_lg_7: 77093589-77097784 Lactuca sativa
Lsat_1_v5_gn_7_54881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 77096785-77097784 Lactuca sativa
Lsat_1_v5_gn_7_54881 1.0kb downstream 1.0kb downstream 4196   true Lsat_1_v8_lg_7: 77092589-77096784 Lactuca sativa
Lsat_1_v5_gn_7_54881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 77092589-77093588 Lactuca sativa
Lsat_1_v5_gn_7_54881 2.0kb upstream 2.0kb upstream 5196   true Lsat_1_v8_lg_7: 77093589-77098784 Lactuca sativa
Lsat_1_v5_gn_7_54881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 77096785-77098784 Lactuca sativa
Lsat_1_v5_gn_7_54881 2.0kb downstream 2.0kb downstream 5196   true Lsat_1_v8_lg_7: 77091589-77096784 Lactuca sativa
Lsat_1_v5_gn_7_54881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 77091589-77093588 Lactuca sativa
Lsat_1_v5_gn_7_54881 5.0kb upstream 5.0kb upstream 8196   true Lsat_1_v8_lg_7: 77093589-77101784 Lactuca sativa
Lsat_1_v5_gn_7_54881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 77096785-77101784 Lactuca sativa
Lsat_1_v5_gn_7_54881 5.0kb downstream 5.0kb downstream 8196   true Lsat_1_v8_lg_7: 77088589-77096784 Lactuca sativa
Lsat_1_v5_gn_7_54881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 77088589-77093588 Lactuca sativa
Lsat_1_v5_gn_7_54881 10.0kb upstream 10.0kb upstream 13196   true Lsat_1_v8_lg_7: 77093589-77106784 Lactuca sativa
Lsat_1_v5_gn_7_54881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 77096785-77106784 Lactuca sativa
Lsat_1_v5_gn_7_54881 10.0kb downstream 10.0kb downstream 13196   true Lsat_1_v8_lg_7: 77083589-77096784 Lactuca sativa
Lsat_1_v5_gn_7_54881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 77083589-77093588 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474604 5263 Asterids View MSA
123740640 5271 Pentapetalae View MSA
122787926 5272 Eudicot View MSA
122046625 5273 Angiosperm View MSA
121349445 5274 Embryophyte View MSA
123426828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain