Gene : Lsat_1_v5_gn_7_54981 L. sativa V8
Defline:  (1 of 2) K12115 - clock-associated PAS protein ZTL (ZTL) Genomic Order:  1741
Name:  ? Lsat_1_v5_gn_7_54981 Secondary Identifier:  ? PAC:38913731
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_54981 0.5kb upstream 0.5kb upstream 4447   true Lsat_1_v8_lg_7: 77172110-77176556 Lactuca sativa
Lsat_1_v5_gn_7_54981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 77176057-77176556 Lactuca sativa
Lsat_1_v5_gn_7_54981 0.5kb downstream 0.5kb downstream 4447   true Lsat_1_v8_lg_7: 77171610-77176056 Lactuca sativa
Lsat_1_v5_gn_7_54981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 77171610-77172109 Lactuca sativa
Lsat_1_v5_gn_7_54981 1.0kb upstream 1.0kb upstream 4947   true Lsat_1_v8_lg_7: 77172110-77177056 Lactuca sativa
Lsat_1_v5_gn_7_54981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 77176057-77177056 Lactuca sativa
Lsat_1_v5_gn_7_54981 1.0kb downstream 1.0kb downstream 4947   true Lsat_1_v8_lg_7: 77171110-77176056 Lactuca sativa
Lsat_1_v5_gn_7_54981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 77171110-77172109 Lactuca sativa
Lsat_1_v5_gn_7_54981 2.0kb upstream 2.0kb upstream 5947   true Lsat_1_v8_lg_7: 77172110-77178056 Lactuca sativa
Lsat_1_v5_gn_7_54981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 77176057-77178056 Lactuca sativa
Lsat_1_v5_gn_7_54981 2.0kb downstream 2.0kb downstream 5947   true Lsat_1_v8_lg_7: 77170110-77176056 Lactuca sativa
Lsat_1_v5_gn_7_54981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 77170110-77172109 Lactuca sativa
Lsat_1_v5_gn_7_54981 5.0kb upstream 5.0kb upstream 8947   true Lsat_1_v8_lg_7: 77172110-77181056 Lactuca sativa
Lsat_1_v5_gn_7_54981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 77176057-77181056 Lactuca sativa
Lsat_1_v5_gn_7_54981 5.0kb downstream 5.0kb downstream 8947   true Lsat_1_v8_lg_7: 77167110-77176056 Lactuca sativa
Lsat_1_v5_gn_7_54981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 77167110-77172109 Lactuca sativa
Lsat_1_v5_gn_7_54981 10.0kb upstream 10.0kb upstream 13947   true Lsat_1_v8_lg_7: 77172110-77186056 Lactuca sativa
Lsat_1_v5_gn_7_54981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 77176057-77186056 Lactuca sativa
Lsat_1_v5_gn_7_54981 10.0kb downstream 10.0kb downstream 13947   true Lsat_1_v8_lg_7: 77162110-77176056 Lactuca sativa
Lsat_1_v5_gn_7_54981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 77162110-77172109 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471398 5263 Asterids View MSA
123751990 5271 Pentapetalae View MSA
122789390 5272 Eudicot View MSA
122047758 5273 Angiosperm View MSA
121310788 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain