Gene : Lsat_1_v5_gn_7_58281 L. sativa V8
Defline:  (1 of 2) K01533 - Cu2+-exporting ATPase (copB) Genomic Order:  1872
Name:  ? Lsat_1_v5_gn_7_58281 Secondary Identifier:  ? PAC:38912675
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_58281 0.5kb upstream 0.5kb upstream 6807   true Lsat_1_v8_lg_7: 85187288-85194094 Lactuca sativa
Lsat_1_v5_gn_7_58281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 85193595-85194094 Lactuca sativa
Lsat_1_v5_gn_7_58281 0.5kb downstream 0.5kb downstream 6807   true Lsat_1_v8_lg_7: 85186788-85193594 Lactuca sativa
Lsat_1_v5_gn_7_58281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 85186788-85187287 Lactuca sativa
Lsat_1_v5_gn_7_58281 1.0kb upstream 1.0kb upstream 7307   true Lsat_1_v8_lg_7: 85187288-85194594 Lactuca sativa
Lsat_1_v5_gn_7_58281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 85193595-85194594 Lactuca sativa
Lsat_1_v5_gn_7_58281 1.0kb downstream 1.0kb downstream 7307   true Lsat_1_v8_lg_7: 85186288-85193594 Lactuca sativa
Lsat_1_v5_gn_7_58281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 85186288-85187287 Lactuca sativa
Lsat_1_v5_gn_7_58281 2.0kb upstream 2.0kb upstream 8307   true Lsat_1_v8_lg_7: 85187288-85195594 Lactuca sativa
Lsat_1_v5_gn_7_58281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 85193595-85195594 Lactuca sativa
Lsat_1_v5_gn_7_58281 2.0kb downstream 2.0kb downstream 8307   true Lsat_1_v8_lg_7: 85185288-85193594 Lactuca sativa
Lsat_1_v5_gn_7_58281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 85185288-85187287 Lactuca sativa
Lsat_1_v5_gn_7_58281 5.0kb upstream 5.0kb upstream 11307   true Lsat_1_v8_lg_7: 85187288-85198594 Lactuca sativa
Lsat_1_v5_gn_7_58281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 85193595-85198594 Lactuca sativa
Lsat_1_v5_gn_7_58281 5.0kb downstream 5.0kb downstream 11307   true Lsat_1_v8_lg_7: 85182288-85193594 Lactuca sativa
Lsat_1_v5_gn_7_58281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 85182288-85187287 Lactuca sativa
Lsat_1_v5_gn_7_58281 10.0kb upstream 10.0kb upstream 16307   true Lsat_1_v8_lg_7: 85187288-85203594 Lactuca sativa
Lsat_1_v5_gn_7_58281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 85193595-85203594 Lactuca sativa
Lsat_1_v5_gn_7_58281 10.0kb downstream 10.0kb downstream 16307   true Lsat_1_v8_lg_7: 85177288-85193594 Lactuca sativa
Lsat_1_v5_gn_7_58281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 85177288-85187287 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467642 5263 Asterids View MSA
123737112 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain