Gene : Lsat_1_v5_gn_7_58800 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1889
Name:  ? Lsat_1_v5_gn_7_58800 Secondary Identifier:  ? PAC:38910688
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_58800 0.5kb upstream 0.5kb upstream 2949   true Lsat_1_v8_lg_7: 86162600-86165548 Lactuca sativa
Lsat_1_v5_gn_7_58800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 86162600-86163099 Lactuca sativa
Lsat_1_v5_gn_7_58800 0.5kb downstream 0.5kb downstream 2949   true Lsat_1_v8_lg_7: 86163100-86166048 Lactuca sativa
Lsat_1_v5_gn_7_58800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 86165549-86166048 Lactuca sativa
Lsat_1_v5_gn_7_58800 1.0kb upstream 1.0kb upstream 3449   true Lsat_1_v8_lg_7: 86162100-86165548 Lactuca sativa
Lsat_1_v5_gn_7_58800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 86162100-86163099 Lactuca sativa
Lsat_1_v5_gn_7_58800 1.0kb downstream 1.0kb downstream 3449   true Lsat_1_v8_lg_7: 86163100-86166548 Lactuca sativa
Lsat_1_v5_gn_7_58800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 86165549-86166548 Lactuca sativa
Lsat_1_v5_gn_7_58800 2.0kb upstream 2.0kb upstream 4449   true Lsat_1_v8_lg_7: 86161100-86165548 Lactuca sativa
Lsat_1_v5_gn_7_58800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 86161100-86163099 Lactuca sativa
Lsat_1_v5_gn_7_58800 2.0kb downstream 2.0kb downstream 4449   true Lsat_1_v8_lg_7: 86163100-86167548 Lactuca sativa
Lsat_1_v5_gn_7_58800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 86165549-86167548 Lactuca sativa
Lsat_1_v5_gn_7_58800 5.0kb upstream 5.0kb upstream 7449   true Lsat_1_v8_lg_7: 86158100-86165548 Lactuca sativa
Lsat_1_v5_gn_7_58800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 86158100-86163099 Lactuca sativa
Lsat_1_v5_gn_7_58800 5.0kb downstream 5.0kb downstream 7449   true Lsat_1_v8_lg_7: 86163100-86170548 Lactuca sativa
Lsat_1_v5_gn_7_58800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 86165549-86170548 Lactuca sativa
Lsat_1_v5_gn_7_58800 10.0kb upstream 10.0kb upstream 12449   true Lsat_1_v8_lg_7: 86153100-86165548 Lactuca sativa
Lsat_1_v5_gn_7_58800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 86153100-86163099 Lactuca sativa
Lsat_1_v5_gn_7_58800 10.0kb downstream 10.0kb downstream 12449   true Lsat_1_v8_lg_7: 86163100-86175548 Lactuca sativa
Lsat_1_v5_gn_7_58800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 86165549-86175548 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472178 5263 Asterids View MSA
123748641 5271 Pentapetalae View MSA
122794556 5272 Eudicot View MSA
122048850 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351271 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain