Gene : Lsat_1_v5_gn_7_59260 L. sativa V8
Defline:  (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Genomic Order:  1860
Name:  ? Lsat_1_v5_gn_7_59260 Secondary Identifier:  ? PAC:38913173
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_59260 0.5kb upstream 0.5kb upstream 3647   true Lsat_1_v8_lg_7: 84190390-84194036 Lactuca sativa
Lsat_1_v5_gn_7_59260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 84193537-84194036 Lactuca sativa
Lsat_1_v5_gn_7_59260 0.5kb downstream 0.5kb downstream 3647   true Lsat_1_v8_lg_7: 84189890-84193536 Lactuca sativa
Lsat_1_v5_gn_7_59260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 84189890-84190389 Lactuca sativa
Lsat_1_v5_gn_7_59260 1.0kb upstream 1.0kb upstream 4147   true Lsat_1_v8_lg_7: 84190390-84194536 Lactuca sativa
Lsat_1_v5_gn_7_59260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 84193537-84194536 Lactuca sativa
Lsat_1_v5_gn_7_59260 1.0kb downstream 1.0kb downstream 4147   true Lsat_1_v8_lg_7: 84189390-84193536 Lactuca sativa
Lsat_1_v5_gn_7_59260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 84189390-84190389 Lactuca sativa
Lsat_1_v5_gn_7_59260 2.0kb upstream 2.0kb upstream 5147   true Lsat_1_v8_lg_7: 84190390-84195536 Lactuca sativa
Lsat_1_v5_gn_7_59260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 84193537-84195536 Lactuca sativa
Lsat_1_v5_gn_7_59260 2.0kb downstream 2.0kb downstream 5147   true Lsat_1_v8_lg_7: 84188390-84193536 Lactuca sativa
Lsat_1_v5_gn_7_59260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 84188390-84190389 Lactuca sativa
Lsat_1_v5_gn_7_59260 5.0kb upstream 5.0kb upstream 8147   true Lsat_1_v8_lg_7: 84190390-84198536 Lactuca sativa
Lsat_1_v5_gn_7_59260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 84193537-84198536 Lactuca sativa
Lsat_1_v5_gn_7_59260 5.0kb downstream 5.0kb downstream 8147   true Lsat_1_v8_lg_7: 84185390-84193536 Lactuca sativa
Lsat_1_v5_gn_7_59260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 84185390-84190389 Lactuca sativa
Lsat_1_v5_gn_7_59260 10.0kb upstream 10.0kb upstream 13147   true Lsat_1_v8_lg_7: 84190390-84203536 Lactuca sativa
Lsat_1_v5_gn_7_59260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 84193537-84203536 Lactuca sativa
Lsat_1_v5_gn_7_59260 10.0kb downstream 10.0kb downstream 13147   true Lsat_1_v8_lg_7: 84180390-84193536 Lactuca sativa
Lsat_1_v5_gn_7_59260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 84180390-84190389 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
121469694 5263 Asterids View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain