Gene : Lsat_1_v5_gn_7_69480 L. sativa V8
Defline:  (1 of 1) PTHR23076:SF44 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC Genomic Order:  2096
Name:  ? Lsat_1_v5_gn_7_69480 Secondary Identifier:  ? PAC:38911941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_69480 0.5kb upstream 0.5kb upstream 6631   true Lsat_1_v8_lg_7: 107920515-107927145 Lactuca sativa
Lsat_1_v5_gn_7_69480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 107920515-107921014 Lactuca sativa
Lsat_1_v5_gn_7_69480 0.5kb downstream 0.5kb downstream 6631   true Lsat_1_v8_lg_7: 107921015-107927645 Lactuca sativa
Lsat_1_v5_gn_7_69480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 107927146-107927645 Lactuca sativa
Lsat_1_v5_gn_7_69480 1.0kb upstream 1.0kb upstream 7131   true Lsat_1_v8_lg_7: 107920015-107927145 Lactuca sativa
Lsat_1_v5_gn_7_69480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 107920015-107921014 Lactuca sativa
Lsat_1_v5_gn_7_69480 1.0kb downstream 1.0kb downstream 7131   true Lsat_1_v8_lg_7: 107921015-107928145 Lactuca sativa
Lsat_1_v5_gn_7_69480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 107927146-107928145 Lactuca sativa
Lsat_1_v5_gn_7_69480 2.0kb upstream 2.0kb upstream 8131   true Lsat_1_v8_lg_7: 107919015-107927145 Lactuca sativa
Lsat_1_v5_gn_7_69480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 107919015-107921014 Lactuca sativa
Lsat_1_v5_gn_7_69480 2.0kb downstream 2.0kb downstream 8131   true Lsat_1_v8_lg_7: 107921015-107929145 Lactuca sativa
Lsat_1_v5_gn_7_69480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 107927146-107929145 Lactuca sativa
Lsat_1_v5_gn_7_69480 5.0kb upstream 5.0kb upstream 11131   true Lsat_1_v8_lg_7: 107916015-107927145 Lactuca sativa
Lsat_1_v5_gn_7_69480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 107916015-107921014 Lactuca sativa
Lsat_1_v5_gn_7_69480 5.0kb downstream 5.0kb downstream 11131   true Lsat_1_v8_lg_7: 107921015-107932145 Lactuca sativa
Lsat_1_v5_gn_7_69480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 107927146-107932145 Lactuca sativa
Lsat_1_v5_gn_7_69480 10.0kb upstream 10.0kb upstream 16131   true Lsat_1_v8_lg_7: 107911015-107927145 Lactuca sativa
Lsat_1_v5_gn_7_69480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 107911015-107921014 Lactuca sativa
Lsat_1_v5_gn_7_69480 10.0kb downstream 10.0kb downstream 16131   true Lsat_1_v8_lg_7: 107921015-107937145 Lactuca sativa
Lsat_1_v5_gn_7_69480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 107927146-107937145 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467217 5263 Asterids View MSA
123736901 5271 Pentapetalae View MSA
122790141 5272 Eudicot View MSA
122047012 5273 Angiosperm View MSA
121345468 5274 Embryophyte View MSA
123380221 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain