Gene : Lsat_1_v5_gn_7_34581 L. sativa V8
Defline:  (1 of 3) PTHR24031//PTHR24031:SF308 - RNA HELICASE // SUBFAMILY NOT NAMED Genomic Order:  1195
Name:  ? Lsat_1_v5_gn_7_34581 Secondary Identifier:  ? PAC:38911925
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_34581 0.5kb upstream 0.5kb upstream 3046   true Lsat_1_v8_lg_7: 49766252-49769297 Lactuca sativa
Lsat_1_v5_gn_7_34581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 49766252-49766751 Lactuca sativa
Lsat_1_v5_gn_7_34581 0.5kb downstream 0.5kb downstream 3046   true Lsat_1_v8_lg_7: 49766752-49769797 Lactuca sativa
Lsat_1_v5_gn_7_34581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 49769298-49769797 Lactuca sativa
Lsat_1_v5_gn_7_34581 1.0kb upstream 1.0kb upstream 3546   true Lsat_1_v8_lg_7: 49765752-49769297 Lactuca sativa
Lsat_1_v5_gn_7_34581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 49765752-49766751 Lactuca sativa
Lsat_1_v5_gn_7_34581 1.0kb downstream 1.0kb downstream 3546   true Lsat_1_v8_lg_7: 49766752-49770297 Lactuca sativa
Lsat_1_v5_gn_7_34581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 49769298-49770297 Lactuca sativa
Lsat_1_v5_gn_7_34581 2.0kb upstream 2.0kb upstream 4546   true Lsat_1_v8_lg_7: 49764752-49769297 Lactuca sativa
Lsat_1_v5_gn_7_34581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 49764752-49766751 Lactuca sativa
Lsat_1_v5_gn_7_34581 2.0kb downstream 2.0kb downstream 4546   true Lsat_1_v8_lg_7: 49766752-49771297 Lactuca sativa
Lsat_1_v5_gn_7_34581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 49769298-49771297 Lactuca sativa
Lsat_1_v5_gn_7_34581 5.0kb upstream 5.0kb upstream 7546   true Lsat_1_v8_lg_7: 49761752-49769297 Lactuca sativa
Lsat_1_v5_gn_7_34581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 49761752-49766751 Lactuca sativa
Lsat_1_v5_gn_7_34581 5.0kb downstream 5.0kb downstream 7546   true Lsat_1_v8_lg_7: 49766752-49774297 Lactuca sativa
Lsat_1_v5_gn_7_34581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 49769298-49774297 Lactuca sativa
Lsat_1_v5_gn_7_34581 10.0kb upstream 10.0kb upstream 12546   true Lsat_1_v8_lg_7: 49756752-49769297 Lactuca sativa
Lsat_1_v5_gn_7_34581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 49756752-49766751 Lactuca sativa
Lsat_1_v5_gn_7_34581 10.0kb downstream 10.0kb downstream 12546   true Lsat_1_v8_lg_7: 49766752-49779297 Lactuca sativa
Lsat_1_v5_gn_7_34581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 49769298-49779297 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478274 5263 Asterids View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain