Gene : Lsat_1_v5_gn_7_34780 L. sativa V8
Defline:  (1 of 19) PF10358 - N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Genomic Order:  1186
Name:  ? Lsat_1_v5_gn_7_34780 Secondary Identifier:  ? PAC:38914701
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_34780 0.5kb upstream 0.5kb upstream 4600   true Lsat_1_v8_lg_7: 49530038-49534637 Lactuca sativa
Lsat_1_v5_gn_7_34780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 49534138-49534637 Lactuca sativa
Lsat_1_v5_gn_7_34780 0.5kb downstream 0.5kb downstream 4600   true Lsat_1_v8_lg_7: 49529538-49534137 Lactuca sativa
Lsat_1_v5_gn_7_34780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 49529538-49530037 Lactuca sativa
Lsat_1_v5_gn_7_34780 1.0kb upstream 1.0kb upstream 5100   true Lsat_1_v8_lg_7: 49530038-49535137 Lactuca sativa
Lsat_1_v5_gn_7_34780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 49534138-49535137 Lactuca sativa
Lsat_1_v5_gn_7_34780 1.0kb downstream 1.0kb downstream 5100   true Lsat_1_v8_lg_7: 49529038-49534137 Lactuca sativa
Lsat_1_v5_gn_7_34780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 49529038-49530037 Lactuca sativa
Lsat_1_v5_gn_7_34780 2.0kb upstream 2.0kb upstream 6100   true Lsat_1_v8_lg_7: 49530038-49536137 Lactuca sativa
Lsat_1_v5_gn_7_34780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 49534138-49536137 Lactuca sativa
Lsat_1_v5_gn_7_34780 2.0kb downstream 2.0kb downstream 6100   true Lsat_1_v8_lg_7: 49528038-49534137 Lactuca sativa
Lsat_1_v5_gn_7_34780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 49528038-49530037 Lactuca sativa
Lsat_1_v5_gn_7_34780 5.0kb upstream 5.0kb upstream 9100   true Lsat_1_v8_lg_7: 49530038-49539137 Lactuca sativa
Lsat_1_v5_gn_7_34780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 49534138-49539137 Lactuca sativa
Lsat_1_v5_gn_7_34780 5.0kb downstream 5.0kb downstream 9100   true Lsat_1_v8_lg_7: 49525038-49534137 Lactuca sativa
Lsat_1_v5_gn_7_34780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 49525038-49530037 Lactuca sativa
Lsat_1_v5_gn_7_34780 10.0kb upstream 10.0kb upstream 14100   true Lsat_1_v8_lg_7: 49530038-49544137 Lactuca sativa
Lsat_1_v5_gn_7_34780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 49534138-49544137 Lactuca sativa
Lsat_1_v5_gn_7_34780 10.0kb downstream 10.0kb downstream 14100   true Lsat_1_v8_lg_7: 49520038-49534137 Lactuca sativa
Lsat_1_v5_gn_7_34780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 49520038-49530037 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041160 5273 Angiosperm View MSA
121467486 5263 Asterids View MSA
123747985 5271 Pentapetalae View MSA
122787610 5272 Eudicot View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain