Gene : Lsat_1_v5_gn_7_35360 L. sativa V8
Defline:  (1 of 7) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  1162
Name:  ? Lsat_1_v5_gn_7_35360 Secondary Identifier:  ? PAC:38913562
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5973 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_35360 0.5kb upstream 0.5kb upstream 4259   true Lsat_1_v8_lg_7: 48925304-48929562 Lactuca sativa
Lsat_1_v5_gn_7_35360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 48929063-48929562 Lactuca sativa
Lsat_1_v5_gn_7_35360 0.5kb downstream 0.5kb downstream 4259   true Lsat_1_v8_lg_7: 48924804-48929062 Lactuca sativa
Lsat_1_v5_gn_7_35360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 48924804-48925303 Lactuca sativa
Lsat_1_v5_gn_7_35360 1.0kb upstream 1.0kb upstream 4759   true Lsat_1_v8_lg_7: 48925304-48930062 Lactuca sativa
Lsat_1_v5_gn_7_35360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 48929063-48930062 Lactuca sativa
Lsat_1_v5_gn_7_35360 1.0kb downstream 1.0kb downstream 4759   true Lsat_1_v8_lg_7: 48924304-48929062 Lactuca sativa
Lsat_1_v5_gn_7_35360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 48924304-48925303 Lactuca sativa
Lsat_1_v5_gn_7_35360 2.0kb upstream 2.0kb upstream 5759   true Lsat_1_v8_lg_7: 48925304-48931062 Lactuca sativa
Lsat_1_v5_gn_7_35360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 48929063-48931062 Lactuca sativa
Lsat_1_v5_gn_7_35360 2.0kb downstream 2.0kb downstream 5759   true Lsat_1_v8_lg_7: 48923304-48929062 Lactuca sativa
Lsat_1_v5_gn_7_35360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 48923304-48925303 Lactuca sativa
Lsat_1_v5_gn_7_35360 5.0kb upstream 5.0kb upstream 8759   true Lsat_1_v8_lg_7: 48925304-48934062 Lactuca sativa
Lsat_1_v5_gn_7_35360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 48929063-48934062 Lactuca sativa
Lsat_1_v5_gn_7_35360 5.0kb downstream 5.0kb downstream 8759   true Lsat_1_v8_lg_7: 48920304-48929062 Lactuca sativa
Lsat_1_v5_gn_7_35360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 48920304-48925303 Lactuca sativa
Lsat_1_v5_gn_7_35360 10.0kb upstream 10.0kb upstream 13759   true Lsat_1_v8_lg_7: 48925304-48939062 Lactuca sativa
Lsat_1_v5_gn_7_35360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 48929063-48939062 Lactuca sativa
Lsat_1_v5_gn_7_35360 10.0kb downstream 10.0kb downstream 13759   true Lsat_1_v8_lg_7: 48915304-48929062 Lactuca sativa
Lsat_1_v5_gn_7_35360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 48915304-48925303 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480230 5263 Asterids View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain