Gene : Lsat_1_v5_gn_7_40621 L. sativa V8
Defline:  (1 of 3) PTHR11909//PTHR11909:SF153 - CASEIN KINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1362
Name:  ? Lsat_1_v5_gn_7_40621 Secondary Identifier:  ? PAC:38911686
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_40621 0.5kb upstream 0.5kb upstream 8362   true Lsat_1_v8_lg_7: 58380109-58388470 Lactuca sativa
Lsat_1_v5_gn_7_40621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 58380109-58380608 Lactuca sativa
Lsat_1_v5_gn_7_40621 0.5kb downstream 0.5kb downstream 8362   true Lsat_1_v8_lg_7: 58380609-58388970 Lactuca sativa
Lsat_1_v5_gn_7_40621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 58388471-58388970 Lactuca sativa
Lsat_1_v5_gn_7_40621 1.0kb upstream 1.0kb upstream 8862   true Lsat_1_v8_lg_7: 58379609-58388470 Lactuca sativa
Lsat_1_v5_gn_7_40621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 58379609-58380608 Lactuca sativa
Lsat_1_v5_gn_7_40621 1.0kb downstream 1.0kb downstream 8862   true Lsat_1_v8_lg_7: 58380609-58389470 Lactuca sativa
Lsat_1_v5_gn_7_40621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 58388471-58389470 Lactuca sativa
Lsat_1_v5_gn_7_40621 2.0kb upstream 2.0kb upstream 9862   true Lsat_1_v8_lg_7: 58378609-58388470 Lactuca sativa
Lsat_1_v5_gn_7_40621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 58378609-58380608 Lactuca sativa
Lsat_1_v5_gn_7_40621 2.0kb downstream 2.0kb downstream 9862   true Lsat_1_v8_lg_7: 58380609-58390470 Lactuca sativa
Lsat_1_v5_gn_7_40621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 58388471-58390470 Lactuca sativa
Lsat_1_v5_gn_7_40621 5.0kb upstream 5.0kb upstream 12862   true Lsat_1_v8_lg_7: 58375609-58388470 Lactuca sativa
Lsat_1_v5_gn_7_40621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 58375609-58380608 Lactuca sativa
Lsat_1_v5_gn_7_40621 5.0kb downstream 5.0kb downstream 12862   true Lsat_1_v8_lg_7: 58380609-58393470 Lactuca sativa
Lsat_1_v5_gn_7_40621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 58388471-58393470 Lactuca sativa
Lsat_1_v5_gn_7_40621 10.0kb upstream 10.0kb upstream 17862   true Lsat_1_v8_lg_7: 58370609-58388470 Lactuca sativa
Lsat_1_v5_gn_7_40621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 58370609-58380608 Lactuca sativa
Lsat_1_v5_gn_7_40621 10.0kb downstream 10.0kb downstream 17862   true Lsat_1_v8_lg_7: 58380609-58398470 Lactuca sativa
Lsat_1_v5_gn_7_40621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 58388471-58398470 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
121451005 5263 Asterids View MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain