Gene : Lsat_1_v5_gn_7_40461 L. sativa V8

Defline:  (1 of 20) K05658 - ATP-binding cassette, subfamily B (MDR/TAP), member 1 (ABCB1) Genomic Order:  1304
Name:  ? Lsat_1_v5_gn_7_40461 Secondary Identifier:  ? PAC:38912369

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_40461 0.5kb upstream 0.5kb upstream 8066   true Lsat_1_v8_lg_7: 55626073-55634138 Lactuca sativa
Lsat_1_v5_gn_7_40461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 55626073-55626572 Lactuca sativa
Lsat_1_v5_gn_7_40461 0.5kb downstream 0.5kb downstream 8066   true Lsat_1_v8_lg_7: 55626573-55634638 Lactuca sativa
Lsat_1_v5_gn_7_40461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 55634139-55634638 Lactuca sativa
Lsat_1_v5_gn_7_40461 1.0kb upstream 1.0kb upstream 8566   true Lsat_1_v8_lg_7: 55625573-55634138 Lactuca sativa
Lsat_1_v5_gn_7_40461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 55625573-55626572 Lactuca sativa
Lsat_1_v5_gn_7_40461 1.0kb downstream 1.0kb downstream 8566   true Lsat_1_v8_lg_7: 55626573-55635138 Lactuca sativa
Lsat_1_v5_gn_7_40461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 55634139-55635138 Lactuca sativa
Lsat_1_v5_gn_7_40461 2.0kb upstream 2.0kb upstream 9566   true Lsat_1_v8_lg_7: 55624573-55634138 Lactuca sativa
Lsat_1_v5_gn_7_40461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 55624573-55626572 Lactuca sativa
Lsat_1_v5_gn_7_40461 2.0kb downstream 2.0kb downstream 9566   true Lsat_1_v8_lg_7: 55626573-55636138 Lactuca sativa
Lsat_1_v5_gn_7_40461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 55634139-55636138 Lactuca sativa
Lsat_1_v5_gn_7_40461 5.0kb upstream 5.0kb upstream 12566   true Lsat_1_v8_lg_7: 55621573-55634138 Lactuca sativa
Lsat_1_v5_gn_7_40461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 55621573-55626572 Lactuca sativa
Lsat_1_v5_gn_7_40461 5.0kb downstream 5.0kb downstream 12566   true Lsat_1_v8_lg_7: 55626573-55639138 Lactuca sativa
Lsat_1_v5_gn_7_40461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 55634139-55639138 Lactuca sativa
Lsat_1_v5_gn_7_40461 10.0kb upstream 10.0kb upstream 17566   true Lsat_1_v8_lg_7: 55616573-55634138 Lactuca sativa
Lsat_1_v5_gn_7_40461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 55616573-55626572 Lactuca sativa
Lsat_1_v5_gn_7_40461 10.0kb downstream 10.0kb downstream 17566   true Lsat_1_v8_lg_7: 55626573-55644138 Lactuca sativa
Lsat_1_v5_gn_7_40461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 55634139-55644138 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470491 5263 Asterids View MSA
123738556 5271 Pentapetalae View MSA
122789934 5272 Eudicot View MSA
122043754 5273 Angiosperm View MSA
121310182 5274 Embryophyte View MSA
123347744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain