Gene : Lsat_1_v5_gn_7_39781 L. sativa V8
Defline:  (1 of 1) PTHR21068:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MIL23-RELATED Genomic Order:  1302
Name:  ? Lsat_1_v5_gn_7_39781 Secondary Identifier:  ? PAC:38914791
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_39781 0.5kb upstream 0.5kb upstream 6601   true Lsat_1_v8_lg_7: 55301648-55308248 Lactuca sativa
Lsat_1_v5_gn_7_39781 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 55301648-55302147 Lactuca sativa
Lsat_1_v5_gn_7_39781 0.5kb downstream 0.5kb downstream 6601   true Lsat_1_v8_lg_7: 55302148-55308748 Lactuca sativa
Lsat_1_v5_gn_7_39781 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 55308249-55308748 Lactuca sativa
Lsat_1_v5_gn_7_39781 1.0kb upstream 1.0kb upstream 7101   true Lsat_1_v8_lg_7: 55301148-55308248 Lactuca sativa
Lsat_1_v5_gn_7_39781 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 55301148-55302147 Lactuca sativa
Lsat_1_v5_gn_7_39781 1.0kb downstream 1.0kb downstream 7101   true Lsat_1_v8_lg_7: 55302148-55309248 Lactuca sativa
Lsat_1_v5_gn_7_39781 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 55308249-55309248 Lactuca sativa
Lsat_1_v5_gn_7_39781 2.0kb upstream 2.0kb upstream 8101   true Lsat_1_v8_lg_7: 55300148-55308248 Lactuca sativa
Lsat_1_v5_gn_7_39781 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 55300148-55302147 Lactuca sativa
Lsat_1_v5_gn_7_39781 2.0kb downstream 2.0kb downstream 8101   true Lsat_1_v8_lg_7: 55302148-55310248 Lactuca sativa
Lsat_1_v5_gn_7_39781 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 55308249-55310248 Lactuca sativa
Lsat_1_v5_gn_7_39781 5.0kb upstream 5.0kb upstream 11101   true Lsat_1_v8_lg_7: 55297148-55308248 Lactuca sativa
Lsat_1_v5_gn_7_39781 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 55297148-55302147 Lactuca sativa
Lsat_1_v5_gn_7_39781 5.0kb downstream 5.0kb downstream 11101   true Lsat_1_v8_lg_7: 55302148-55313248 Lactuca sativa
Lsat_1_v5_gn_7_39781 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 55308249-55313248 Lactuca sativa
Lsat_1_v5_gn_7_39781 10.0kb upstream 10.0kb upstream 16101   true Lsat_1_v8_lg_7: 55292148-55308248 Lactuca sativa
Lsat_1_v5_gn_7_39781 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 55292148-55302147 Lactuca sativa
Lsat_1_v5_gn_7_39781 10.0kb downstream 10.0kb downstream 16101   true Lsat_1_v8_lg_7: 55302148-55318248 Lactuca sativa
Lsat_1_v5_gn_7_39781 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 55308249-55318248 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026413 5273 Angiosperm View MSA
121473832 5263 Asterids View MSA
123740247 5271 Pentapetalae View MSA
122787553 5272 Eudicot View MSA
121296318 5274 Embryophyte View MSA
123334500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain