Gene : Lsat_1_v5_gn_7_41741 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1337
Name:  ? Lsat_1_v5_gn_7_41741 Secondary Identifier:  ? PAC:38913767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_41741 0.5kb upstream 0.5kb upstream 2419   true Lsat_1_v8_lg_7: 57387514-57389932 Lactuca sativa
Lsat_1_v5_gn_7_41741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 57389433-57389932 Lactuca sativa
Lsat_1_v5_gn_7_41741 0.5kb downstream 0.5kb downstream 2419   true Lsat_1_v8_lg_7: 57387014-57389432 Lactuca sativa
Lsat_1_v5_gn_7_41741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 57387014-57387513 Lactuca sativa
Lsat_1_v5_gn_7_41741 1.0kb upstream 1.0kb upstream 2919   true Lsat_1_v8_lg_7: 57387514-57390432 Lactuca sativa
Lsat_1_v5_gn_7_41741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 57389433-57390432 Lactuca sativa
Lsat_1_v5_gn_7_41741 1.0kb downstream 1.0kb downstream 2919   true Lsat_1_v8_lg_7: 57386514-57389432 Lactuca sativa
Lsat_1_v5_gn_7_41741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 57386514-57387513 Lactuca sativa
Lsat_1_v5_gn_7_41741 2.0kb upstream 2.0kb upstream 3919   true Lsat_1_v8_lg_7: 57387514-57391432 Lactuca sativa
Lsat_1_v5_gn_7_41741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 57389433-57391432 Lactuca sativa
Lsat_1_v5_gn_7_41741 2.0kb downstream 2.0kb downstream 3919   true Lsat_1_v8_lg_7: 57385514-57389432 Lactuca sativa
Lsat_1_v5_gn_7_41741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 57385514-57387513 Lactuca sativa
Lsat_1_v5_gn_7_41741 5.0kb upstream 5.0kb upstream 6919   true Lsat_1_v8_lg_7: 57387514-57394432 Lactuca sativa
Lsat_1_v5_gn_7_41741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 57389433-57394432 Lactuca sativa
Lsat_1_v5_gn_7_41741 5.0kb downstream 5.0kb downstream 6919   true Lsat_1_v8_lg_7: 57382514-57389432 Lactuca sativa
Lsat_1_v5_gn_7_41741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 57382514-57387513 Lactuca sativa
Lsat_1_v5_gn_7_41741 10.0kb upstream 10.0kb upstream 11919   true Lsat_1_v8_lg_7: 57387514-57399432 Lactuca sativa
Lsat_1_v5_gn_7_41741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 57389433-57399432 Lactuca sativa
Lsat_1_v5_gn_7_41741 10.0kb downstream 10.0kb downstream 11919   true Lsat_1_v8_lg_7: 57377514-57389432 Lactuca sativa
Lsat_1_v5_gn_7_41741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 57377514-57387513 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474018 5263 Asterids View MSA
123741798 5271 Pentapetalae View MSA
122789514 5272 Eudicot View MSA
122049493 5273 Angiosperm View MSA
121311435 5274 Embryophyte View MSA
123348731 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain