Gene : Lsat_1_v5_gn_7_41160 L. sativa V8
Defline:  (1 of 1) PTHR31413:SF2 - AFP HOMOLOG 2 Genomic Order:  1318
Name:  ? Lsat_1_v5_gn_7_41160 Secondary Identifier:  ? PAC:38910172
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_41160 0.5kb upstream 0.5kb upstream 2792   true Lsat_1_v8_lg_7: 56934270-56937061 Lactuca sativa
Lsat_1_v5_gn_7_41160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 56934270-56934769 Lactuca sativa
Lsat_1_v5_gn_7_41160 0.5kb downstream 0.5kb downstream 2792   true Lsat_1_v8_lg_7: 56934770-56937561 Lactuca sativa
Lsat_1_v5_gn_7_41160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 56937062-56937561 Lactuca sativa
Lsat_1_v5_gn_7_41160 1.0kb upstream 1.0kb upstream 3292   true Lsat_1_v8_lg_7: 56933770-56937061 Lactuca sativa
Lsat_1_v5_gn_7_41160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 56933770-56934769 Lactuca sativa
Lsat_1_v5_gn_7_41160 1.0kb downstream 1.0kb downstream 3292   true Lsat_1_v8_lg_7: 56934770-56938061 Lactuca sativa
Lsat_1_v5_gn_7_41160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 56937062-56938061 Lactuca sativa
Lsat_1_v5_gn_7_41160 2.0kb upstream 2.0kb upstream 4292   true Lsat_1_v8_lg_7: 56932770-56937061 Lactuca sativa
Lsat_1_v5_gn_7_41160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 56932770-56934769 Lactuca sativa
Lsat_1_v5_gn_7_41160 2.0kb downstream 2.0kb downstream 4292   true Lsat_1_v8_lg_7: 56934770-56939061 Lactuca sativa
Lsat_1_v5_gn_7_41160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 56937062-56939061 Lactuca sativa
Lsat_1_v5_gn_7_41160 5.0kb upstream 5.0kb upstream 7292   true Lsat_1_v8_lg_7: 56929770-56937061 Lactuca sativa
Lsat_1_v5_gn_7_41160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 56929770-56934769 Lactuca sativa
Lsat_1_v5_gn_7_41160 5.0kb downstream 5.0kb downstream 7292   true Lsat_1_v8_lg_7: 56934770-56942061 Lactuca sativa
Lsat_1_v5_gn_7_41160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 56937062-56942061 Lactuca sativa
Lsat_1_v5_gn_7_41160 10.0kb upstream 10.0kb upstream 12292   true Lsat_1_v8_lg_7: 56924770-56937061 Lactuca sativa
Lsat_1_v5_gn_7_41160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 56924770-56934769 Lactuca sativa
Lsat_1_v5_gn_7_41160 10.0kb downstream 10.0kb downstream 12292   true Lsat_1_v8_lg_7: 56934770-56947061 Lactuca sativa
Lsat_1_v5_gn_7_41160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 56937062-56947061 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468062 5263 Asterids View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain