Gene : Lsat_1_v5_gn_7_42660 L. sativa V8
Defline:  (1 of 9) KOG0107 - Alternative splicing factor SRp20/9G8 (RRM superfamily) Genomic Order:  1382
Name:  ? Lsat_1_v5_gn_7_42660 Secondary Identifier:  ? PAC:38914307
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_42660 0.5kb upstream 0.5kb upstream 3022   true Lsat_1_v8_lg_7: 59346670-59349691 Lactuca sativa
Lsat_1_v5_gn_7_42660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 59349192-59349691 Lactuca sativa
Lsat_1_v5_gn_7_42660 0.5kb downstream 0.5kb downstream 3022   true Lsat_1_v8_lg_7: 59346170-59349191 Lactuca sativa
Lsat_1_v5_gn_7_42660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 59346170-59346669 Lactuca sativa
Lsat_1_v5_gn_7_42660 1.0kb upstream 1.0kb upstream 3522   true Lsat_1_v8_lg_7: 59346670-59350191 Lactuca sativa
Lsat_1_v5_gn_7_42660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 59349192-59350191 Lactuca sativa
Lsat_1_v5_gn_7_42660 1.0kb downstream 1.0kb downstream 3522   true Lsat_1_v8_lg_7: 59345670-59349191 Lactuca sativa
Lsat_1_v5_gn_7_42660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 59345670-59346669 Lactuca sativa
Lsat_1_v5_gn_7_42660 2.0kb upstream 2.0kb upstream 4522   true Lsat_1_v8_lg_7: 59346670-59351191 Lactuca sativa
Lsat_1_v5_gn_7_42660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 59349192-59351191 Lactuca sativa
Lsat_1_v5_gn_7_42660 2.0kb downstream 2.0kb downstream 4522   true Lsat_1_v8_lg_7: 59344670-59349191 Lactuca sativa
Lsat_1_v5_gn_7_42660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 59344670-59346669 Lactuca sativa
Lsat_1_v5_gn_7_42660 5.0kb upstream 5.0kb upstream 7522   true Lsat_1_v8_lg_7: 59346670-59354191 Lactuca sativa
Lsat_1_v5_gn_7_42660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 59349192-59354191 Lactuca sativa
Lsat_1_v5_gn_7_42660 5.0kb downstream 5.0kb downstream 7522   true Lsat_1_v8_lg_7: 59341670-59349191 Lactuca sativa
Lsat_1_v5_gn_7_42660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 59341670-59346669 Lactuca sativa
Lsat_1_v5_gn_7_42660 10.0kb upstream 10.0kb upstream 12522   true Lsat_1_v8_lg_7: 59346670-59359191 Lactuca sativa
Lsat_1_v5_gn_7_42660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 59349192-59359191 Lactuca sativa
Lsat_1_v5_gn_7_42660 10.0kb downstream 10.0kb downstream 12522   true Lsat_1_v8_lg_7: 59336670-59349191 Lactuca sativa
Lsat_1_v5_gn_7_42660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 59336670-59346669 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041103 5273 Angiosperm View MSA
121472249 5263 Asterids View MSA
123740739 5271 Pentapetalae View MSA
122788079 5272 Eudicot View MSA
121345808 5274 Embryophyte View MSA
123427736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain