Gene : Lsat_1_v5_gn_7_43121 L. sativa V8
Defline:  (1 of 4) K08490 - syntaxin 5 (STX5) Genomic Order:  1370
Name:  ? Lsat_1_v5_gn_7_43121 Secondary Identifier:  ? PAC:38910278
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_43121 0.5kb upstream 0.5kb upstream 2625   true Lsat_1_v8_lg_7: 58843702-58846326 Lactuca sativa
Lsat_1_v5_gn_7_43121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 58843702-58844201 Lactuca sativa
Lsat_1_v5_gn_7_43121 0.5kb downstream 0.5kb downstream 2625   true Lsat_1_v8_lg_7: 58844202-58846826 Lactuca sativa
Lsat_1_v5_gn_7_43121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 58846327-58846826 Lactuca sativa
Lsat_1_v5_gn_7_43121 1.0kb upstream 1.0kb upstream 3125   true Lsat_1_v8_lg_7: 58843202-58846326 Lactuca sativa
Lsat_1_v5_gn_7_43121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 58843202-58844201 Lactuca sativa
Lsat_1_v5_gn_7_43121 1.0kb downstream 1.0kb downstream 3125   true Lsat_1_v8_lg_7: 58844202-58847326 Lactuca sativa
Lsat_1_v5_gn_7_43121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 58846327-58847326 Lactuca sativa
Lsat_1_v5_gn_7_43121 2.0kb upstream 2.0kb upstream 4125   true Lsat_1_v8_lg_7: 58842202-58846326 Lactuca sativa
Lsat_1_v5_gn_7_43121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 58842202-58844201 Lactuca sativa
Lsat_1_v5_gn_7_43121 2.0kb downstream 2.0kb downstream 4125   true Lsat_1_v8_lg_7: 58844202-58848326 Lactuca sativa
Lsat_1_v5_gn_7_43121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 58846327-58848326 Lactuca sativa
Lsat_1_v5_gn_7_43121 5.0kb upstream 5.0kb upstream 7125   true Lsat_1_v8_lg_7: 58839202-58846326 Lactuca sativa
Lsat_1_v5_gn_7_43121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 58839202-58844201 Lactuca sativa
Lsat_1_v5_gn_7_43121 5.0kb downstream 5.0kb downstream 7125   true Lsat_1_v8_lg_7: 58844202-58851326 Lactuca sativa
Lsat_1_v5_gn_7_43121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 58846327-58851326 Lactuca sativa
Lsat_1_v5_gn_7_43121 10.0kb upstream 10.0kb upstream 12125   true Lsat_1_v8_lg_7: 58834202-58846326 Lactuca sativa
Lsat_1_v5_gn_7_43121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 58834202-58844201 Lactuca sativa
Lsat_1_v5_gn_7_43121 10.0kb downstream 10.0kb downstream 12125   true Lsat_1_v8_lg_7: 58844202-58856326 Lactuca sativa
Lsat_1_v5_gn_7_43121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 58846327-58856326 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480770 5263 Asterids View MSA
123741703 5271 Pentapetalae View MSA
122789258 5272 Eudicot View MSA
122042790 5273 Angiosperm View MSA
121345451 5274 Embryophyte View MSA
123424461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain