Gene : Lsat_1_v5_gn_7_45260 L. sativa V8
Defline:  (1 of 2) K00510 - heme oxygenase (HMOX, hmuO, ho) Genomic Order:  1412
Name:  ? Lsat_1_v5_gn_7_45260 Secondary Identifier:  ? PAC:38911408
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5874 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_45260 0.5kb upstream 0.5kb upstream 2769   true Lsat_1_v8_lg_7: 60039293-60042061 Lactuca sativa
Lsat_1_v5_gn_7_45260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 60041562-60042061 Lactuca sativa
Lsat_1_v5_gn_7_45260 0.5kb downstream 0.5kb downstream 2769   true Lsat_1_v8_lg_7: 60038793-60041561 Lactuca sativa
Lsat_1_v5_gn_7_45260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 60038793-60039292 Lactuca sativa
Lsat_1_v5_gn_7_45260 1.0kb upstream 1.0kb upstream 3269   true Lsat_1_v8_lg_7: 60039293-60042561 Lactuca sativa
Lsat_1_v5_gn_7_45260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 60041562-60042561 Lactuca sativa
Lsat_1_v5_gn_7_45260 1.0kb downstream 1.0kb downstream 3269   true Lsat_1_v8_lg_7: 60038293-60041561 Lactuca sativa
Lsat_1_v5_gn_7_45260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 60038293-60039292 Lactuca sativa
Lsat_1_v5_gn_7_45260 2.0kb upstream 2.0kb upstream 4269   true Lsat_1_v8_lg_7: 60039293-60043561 Lactuca sativa
Lsat_1_v5_gn_7_45260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 60041562-60043561 Lactuca sativa
Lsat_1_v5_gn_7_45260 2.0kb downstream 2.0kb downstream 4269   true Lsat_1_v8_lg_7: 60037293-60041561 Lactuca sativa
Lsat_1_v5_gn_7_45260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 60037293-60039292 Lactuca sativa
Lsat_1_v5_gn_7_45260 5.0kb upstream 5.0kb upstream 7269   true Lsat_1_v8_lg_7: 60039293-60046561 Lactuca sativa
Lsat_1_v5_gn_7_45260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 60041562-60046561 Lactuca sativa
Lsat_1_v5_gn_7_45260 5.0kb downstream 5.0kb downstream 7269   true Lsat_1_v8_lg_7: 60034293-60041561 Lactuca sativa
Lsat_1_v5_gn_7_45260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 60034293-60039292 Lactuca sativa
Lsat_1_v5_gn_7_45260 10.0kb upstream 10.0kb upstream 12269   true Lsat_1_v8_lg_7: 60039293-60051561 Lactuca sativa
Lsat_1_v5_gn_7_45260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 60041562-60051561 Lactuca sativa
Lsat_1_v5_gn_7_45260 10.0kb downstream 10.0kb downstream 12269   true Lsat_1_v8_lg_7: 60029293-60041561 Lactuca sativa
Lsat_1_v5_gn_7_45260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 60029293-60039292 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472115 5263 Asterids View MSA
123739396 5271 Pentapetalae View MSA
122788325 5272 Eudicot View MSA
122047622 5273 Angiosperm View MSA
121347679 5274 Embryophyte View MSA
123424297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain