Gene : Lsat_1_v5_gn_7_46821 L. sativa V8
Defline:  (1 of 1) KOG0037//KOG2643 - Ca2+-binding protein, EF-Hand protein superfamily // Ca2+ binding protein, contains EF-hand motifs Genomic Order:  1482
Name:  ? Lsat_1_v5_gn_7_46821 Secondary Identifier:  ? PAC:38913585
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_7_46821 0.5kb upstream 0.5kb upstream 7475   true Lsat_1_v8_lg_7: 63023955-63031429 Lactuca sativa
Lsat_1_v5_gn_7_46821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_7: 63030930-63031429 Lactuca sativa
Lsat_1_v5_gn_7_46821 0.5kb downstream 0.5kb downstream 7475   true Lsat_1_v8_lg_7: 63023455-63030929 Lactuca sativa
Lsat_1_v5_gn_7_46821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_7: 63023455-63023954 Lactuca sativa
Lsat_1_v5_gn_7_46821 1.0kb upstream 1.0kb upstream 7975   true Lsat_1_v8_lg_7: 63023955-63031929 Lactuca sativa
Lsat_1_v5_gn_7_46821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_7: 63030930-63031929 Lactuca sativa
Lsat_1_v5_gn_7_46821 1.0kb downstream 1.0kb downstream 7975   true Lsat_1_v8_lg_7: 63022955-63030929 Lactuca sativa
Lsat_1_v5_gn_7_46821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_7: 63022955-63023954 Lactuca sativa
Lsat_1_v5_gn_7_46821 2.0kb upstream 2.0kb upstream 8975   true Lsat_1_v8_lg_7: 63023955-63032929 Lactuca sativa
Lsat_1_v5_gn_7_46821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_7: 63030930-63032929 Lactuca sativa
Lsat_1_v5_gn_7_46821 2.0kb downstream 2.0kb downstream 8975   true Lsat_1_v8_lg_7: 63021955-63030929 Lactuca sativa
Lsat_1_v5_gn_7_46821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_7: 63021955-63023954 Lactuca sativa
Lsat_1_v5_gn_7_46821 5.0kb upstream 5.0kb upstream 11975   true Lsat_1_v8_lg_7: 63023955-63035929 Lactuca sativa
Lsat_1_v5_gn_7_46821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_7: 63030930-63035929 Lactuca sativa
Lsat_1_v5_gn_7_46821 5.0kb downstream 5.0kb downstream 11975   true Lsat_1_v8_lg_7: 63018955-63030929 Lactuca sativa
Lsat_1_v5_gn_7_46821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_7: 63018955-63023954 Lactuca sativa
Lsat_1_v5_gn_7_46821 10.0kb upstream 10.0kb upstream 16975   true Lsat_1_v8_lg_7: 63023955-63040929 Lactuca sativa
Lsat_1_v5_gn_7_46821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_7: 63030930-63040929 Lactuca sativa
Lsat_1_v5_gn_7_46821 10.0kb downstream 10.0kb downstream 16975   true Lsat_1_v8_lg_7: 63013955-63030929 Lactuca sativa
Lsat_1_v5_gn_7_46821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_7: 63013955-63023954 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477198 5263 Asterids View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain